Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq368 134 1e-26 >seq368 Length=53407 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29648 AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCC 29707 || ||||| | ||||| | |||||||| ||||||||||| ||||||||||| ||||| Sbjct 46972 AGAGGTTCAATGTGGTTAGAATAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTCTCCT 46913 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 |||| || ||||||||| || ||||| || |||||||||| || ||||| |||||| Sbjct 46912 GGTTTGAGATTGGTGACGTGGGCGATCATATAAGTGAGGAGAGCATAACTGGCTATGTTA 46853 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCG 29827 || || || || | ||||| || | || || || || | || || || | || || Sbjct 46852 AAAGGAACTCCTAAGCCCATATCAGCAGATCTTTGATACAATTGACAAGATAATTCCCCA 46793 Query 29828 TCGCTCACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCAT 29874 | ||| |||||||| || | || ||||| |||||||| ||||| Sbjct 46792 TTTGCCACATAAAACTG-TACCAGACAGTGGCAAGGAGGAAGTGCCAT 46746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405950909410996