Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq368 123 2e-23 >seq368 Length=53407 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27163 TAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 27222 |||||||| || |||||||| ||||||||||| ||||| |||| || ||||||||| Sbjct 46951 TAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTCTCCTGGTTTGAGATTGGTGACGTGG 46892 Query 27223 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 27282 || ||||| || |||||||||| || ||||| |||||||| || || || | ||||| Sbjct 46891 GCGATCATATAAGTGAGGAGAGCATAACTGGCTATGTTAAAAGGAACTCCTAAGCCCATA 46832 Query 27283 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACAT 27342 || | || || || || | ||||| || | || |||| || |||||||| Sbjct 46831 TCAGCAGATCTTTGATACAATTGACAAGATAATTCCCCATTTGCCACATAAAACTGTACC 46772 Query 27343 ATGGCGTGGCACGGAGGAAGAGCCAT 27368 | |||||| |||||||| ||||| Sbjct 46771 AGACAGTGGCAAGGAGGAAGTGCCAT 46746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369314068517066