Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq22640 159 8e-34 >seq22640 Length=7414 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || ||||| ||||||||||||||||| ||| ||| Sbjct 1457 CAGATCTTCGTGAAGACCCTAACGGGGAAAACTATCACCCTCGAGGTGGAGCCCTCTGAC 1398 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 1397 ACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 1338 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||||||||| ||||| || ||||| | || || |||| || ||| || Sbjct 1337 CGATTGATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATC 1278 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1277 CAGAAGGAGTCCACCCTCCA-CTTG 1254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203069777541884