Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq19288 132 4e-26 >seq19288 Length=6598 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || ||| ||||||||| ||||| |||||||| ||||| || Sbjct 4258 AGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGG 4317 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||| ||||| |||| ||||| || || | ||||| | |||| Sbjct 4318 CCGTCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATTCCCTCC 4377 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| ||| || ||||| | | ||||||| | ||| ||||| | || Sbjct 4378 TTGTCCTGGATCTTGGCCTTCACATTCTCGATAGTGTCGGAGGGCTCGACCTCAAGGGTG 4437 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || |||| ||||| ||||| |||||||| || Sbjct 4438 ATGGTCTTGCCGGTCAATGTCTTGACGAAGATCTGCATCTT 4478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462056170383200