Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 517 1e-141 seq64 495 4e-135 seq43 210 3e-49 >seq2 Length=1318413 Score = 517 bits (572), Expect = 1e-141 Identities = 1431/2167 (66%), Gaps = 69/2167 (3%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| | | | || || || ||||||| || |||||||| ||||| | Sbjct 931627 GTGAATTGAATTGCATTAGCAGCTGGCTTTGTACGTAAGTAATACATTCCAGTTTTCAAT 931568 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | ||||| | | || || || || | || |||| | || || || | Sbjct 931567 CCCATTTTCCATGCATGGAAGTGAATTGAAGTCAACTTTCCATAATTTGGTTCAGCAACG 931508 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT- 52986 || ||||| | ||||| |||||||||||| || || | || || ||||||| || Sbjct 931507 TGAATATTAAATGATTGTGATTGATCGATGAATGCACCACGATCAGCTGCCATTTGAATT 931448 Query 52987 -GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGGA 53044 ||| ||||| || |||||||||| || || |||| ||| | |||||||| |||| Sbjct 931447 TGAT--TCTTTACTGACATTTCCCAAACGGTCTTGTAAATCTCACG-AATATCTTGTGGA 931391 Query 53045 AGGT-TTGTATTC--TGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101 | | || ||| ||||| ||||| | | || || |||| || || |||||| Sbjct 931390 ATTTCTTCAATTGATTGAATTGATCCGTTGTTGCCGATGATTTTATTTTTCATGTCATCA 931331 Query 53102 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 53161 | ||| || | | || || ||| | | | |||||| ||||||| |||||||| ||| Sbjct 931330 TCCCACAAATCACGTTCAGTCAAATCCTTGATGAGATGATGATTAACAACTTGAAACTCT 931271 Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221 ||| | || | || |||||| || || || || ||||| | ||||| || Sbjct 931270 CCACTAAGAACACGTCGGTTGTAAACGTTGCTTGTGTATGGTTCGAAGCTTTCATTGTTG 931211 Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281 || | ||||||||| ||||| ||||||||||| ||||||||||| || ||| | || Sbjct 931210 CCGAGAATTTGAGCCGTTGAAGCAGTCGGCATTGGTGCCACCAACAATGAATTACGAACG 931151 Query 53282 CCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 53339 || ||| | | ||||| || || | || ||||||||||||||| | || Sbjct 931150 CC--ATGCTTAGCAATTTTCTCCTTCAAAGTGGACCAATTCCAAAGATCTGTTGGCGTTT 931093 Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTA----CTGGCGTACGATCCTACATATGTA 53395 ||| ||||| || ||| |||||| ||||| |||| || Sbjct 931092 TATTCCACATATCGTATTGAAGAATTCCTTTAGATACTGGCG----ATCCTTCATAAGTC 931037 Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455 ||||| | ||| | ||||| ||||||||||| || || ||||| ||||||||||| Sbjct 931036 TCGTAAGTTCCAAATTCTTCAGCAAGTTCACAACTTGCTTCCAATGCTCCGTAATAAATT 930977 Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT--A 53513 ||||| ||||| | || ||| || | |||||||| | ||||| || ||| | Sbjct 930976 GTTTCAAAGATTTGCTGATTAAGTTTCTGTGCTTCGGGAGATTCAAAAGGC--ATTCGCA 930919 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | ||| || || || ||||| |||||||| ||||| || || || | ||| | | ||| Sbjct 930918 TCATAATGAAAGCATCAGCTAAGCCTTGAACTCCAATTCCAATGGGACGATGACGCATAT 930859 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633 | || || ||||| |||| ||||| ||||||| || || ||||||||||| ||| Sbjct 930858 TTGATCGTTTGGCTTCCGGAACTGGATAGTAATTAACGTCAATGATTTTATTGAGATTTT 930799 Query 53634 T---GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTG------TCCAT 53684 | |||| || |||| | || ||||| | ||| || ||| | | ||||| Sbjct 930798 TTGTGACAGTT--TTTGTC-ACTTCCTTTAATTTCTTGAAGTCATAATCCTTACTTCCAT 930742 Query 53685 CTATT-------ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737 |||| ||||||||||| | ||||| || || | |||||||| || || ||| Sbjct 930741 -TATTTGCAACGACAAACATGTTGACAGCAATTGAAGCTAAGTTACAAACTGCAACTTCA 930683 Query 53738 T--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 | | || | | ||||| | || || ||||| ||||| || || || || | Sbjct 930682 TCTTTGCTT--GAATATTCAACAATTTCTGTGCATAGATTTGAGCAACGAATAGTGCCAA 930625 Query 53796 AATTTTGTTGATTACTCTTTTTG-TTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854 || |||||||| | ||| | || || || || |||||||| ||| | || || ||| Sbjct 930624 CGTTCTGTTGATT-CGATTTGCGATTGCAAGCGTCTTTATAAAGCATGTAAGGAGTTCCA 930566 Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914 ||||||| || || || || ||||| ||| | | |||| || | | || Sbjct 930565 GTTTCAACTTGTGACTCGATGATCGCAAACCAAAGATCTTGAGCTTTCACCTGACGAATG 930506 Query 53915 TATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974 || | ||| ||| ||| | ||| | | || || || || |||||| || | Sbjct 930505 TAACGTCCTTCAGCTTCTTATTTTTCATAAAGTTTCTCGAAATCTTCACCCCAAGTATCG 930446 Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA-CTCG 54033 || |||| | || ||||||||||| |||||| ||| | | | |||| | || Sbjct 930445 AATAAATTTGGACTGTTATGAGGACACATCAAAGACCACATTCCATTA-CTTTCAACACG 930387 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCT 54092 |||||| | ||| || ||||||||||| ||| || | || | | || | ||| | Sbjct 930386 ACGCATAAACAAATCGGGGATCCAAAGAGC-ATAGAACATGTCACGAGCTCGAGCTTCTT 930328 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | ||||| || || || || | ||| |||||| | | ||| || |||||| ||||| | Sbjct 930327 CTTTTCCAGTGTTTTTCTTCAAATCAAGGAACTCAAAAATGTCGCCATGCCAAGGTTCAA 930268 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 || |||| | | |||| || |||||||| || || || || | || | ||| |||| Sbjct 930267 GATAAATGGCGAAAGCTCCTGGACGTTTGTTGCCACCTTGGTCGACATAACGAGCTGTGT 930208 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 | ||||||||||||| ||| |||| | |||||| || ||||| || || | || | Sbjct 930207 TGTTATAAACTCTCAGCATGGGAACGAGACCATTTGAAATCCCATTTGTGCCAGCAATGT 930148 Query 54273 AGCTTCCACTGGCACGAAT---ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAG 54329 ||||||| |||| ||||| || | | || || || || || ||||| |||| Sbjct 930147 AGCTTCCTTTGGCTCGAATGCAATGAACATTTAAT---CCAATGCCTCCTGCTGATTTAC 930091 Query 54330 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 54389 ||| |||| ||| | | | || |||| ||||| || ||| ||| || ||| Sbjct 930090 TGATCAATGAACATTGCATGAGAGTTCCATAAATGCCTTCAATAGAATCCTCGGACATTG 930031 Query 54390 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 54449 | || ||||| ||||| ||| | ||| ||| | || || | || |||| Sbjct 930030 ACAATAAGAAACATGAAGACAATTGTGGTCGAGGTGTTGCAGCTGCGAAGAGTGTTGGAG 929971 Query 54450 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT 54509 | || ||||| || || ||| || | || |||||| || || || |||| || |||| Sbjct 929970 AGGCATGCGTGAAATATCGTTCCGACAATAAATTGTAAGTTTCAATTGCTGCATCAATAT 929911 Query 54510 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 54569 | |||||| || || || || ||||||||||| || || || | ||| || |||| Sbjct 929910 CTTCGCCATGAATGCCAACAGCAACTCGCATTAACATATGTTGTGGACGTTCGACAATCT 929851 Query 54570 TGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 54629 | || ||| ||| ||||||| | ||||| ||||| || |||||||||||||| Sbjct 929850 TTCCTTTGATTCTCAACAAGTAGCTTCGCTCCAAGGTTTTGAATCCAAAATAGTTGTAAC 929791 Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689 |||||| || || || ||||| | || || | ||| || || | | | | Sbjct 929790 CAAAGTCACGATCATAGATAATTGCCGAATTTAAGCGATCAGCATTCTTCATTATGATGT 929731 Query 54690 C--CATGGTAAT-ACTTGAAATAATCGGAGAATGTTTC-CCATTTTTAGGATTGACATAG 54745 | |||| ||| |||| || || || | | ||| || | | | || ||| | Sbjct 929730 CATGATGGAAATCACTT---ATCATTGGTGTTTTCTTCTTCAAATATTCGTTTTCCAT-G 929675 Query 54746 TTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 54805 || || | || | ||| || ||||| ||| ||||||| ||||||||||||| ||| ||| Sbjct 929674 TTGAAGAGGTCATCCATAACATCACTGAATTGTTTTTTAGTTTCTTTGTGTAAATTCGAT 929615 Query 54806 ACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCT 54865 || || || | ||| || |||| ||| ||||| | ||| | || || || || || Sbjct 929614 ACAGCAATACGAGCTGCAAGAACGGCGTAATCTGCATGGTCAGTTGTCATTGTTGCAGCC 929555 Query 54866 ATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 54925 | || |||| | | | || | ||| || |||||||| ||| |||| | || | ||| Sbjct 929554 GTCTCAGCTGCTAAATTATCAAGTTCAACTGTTGTTACGCCAGTATAGAGACCATTAATA 929495 Query 54926 ACCTTCA 54932 || |||| Sbjct 929494 ACTTTCA 929488 Score = 351 bits (388), Expect = 1e-91 Identities = 962/1452 (66%), Gaps = 55/1452 (4%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| | | | || || || ||||||| || |||||||| ||||| | Sbjct 923510 GTGAATTGAATTGCATTAGCAGCTGGCTTTGTACGTAAGTAATACATTCCAGTTTTCAAT 923451 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | ||||| | | || || || || | || |||| | || || || | Sbjct 923450 CCCATTTTCCATGCATGGAAGTGAATTGAAGTCAACTTTCCATAATTTGGTTCAGCAACG 923391 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT- 52986 || ||||| | ||||| |||||||||||| || || | || || ||||||| || Sbjct 923390 TGAATATTAAATGATTGTGATTGATCGATGAATGCACCACGATCAGCTGCCATTTGAATT 923331 Query 52987 -GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGGA 53044 ||| ||||| || |||||||||| || || |||| ||| | |||||||| |||| Sbjct 923330 TGAT--TCTTTACTGACATTTCCCAAACGGTCTTGTAAATCTCACG-AATATCTTGTGGA 923274 Query 53045 AGGT-TTGTATTC--TGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101 | | || ||| ||||| ||||| | | || || |||| || || |||||| Sbjct 923273 ATTTCTTCAATTGATTGAATTGATCCGTTGTTGCCGATGATTTTATTTTTCATGTCATCA 923214 Query 53102 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 53161 | ||| || | | || || ||| | | | |||||| ||||||| |||||||| ||| Sbjct 923213 TCCCACAAATCACGTTCAGTCAAATCCTTGATGAGATGATGATTAACAACTTGAAACTCT 923154 Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221 ||| | || | || |||||| || || || || ||||| | ||||| || Sbjct 923153 CCACTAAGAACACGTCGGTTGTAAACGTTGCTTGTGTATGGTTCGAAGCTTTCATTGTTG 923094 Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281 || | ||||||||| ||||| ||||||||||| ||||||||||| || ||| | || Sbjct 923093 CCGAGAATTTGAGCCGTTGAAGCAGTCGGCATTGGTGCCACCAACAATGAATTACGAACG 923034 Query 53282 CCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 53339 || ||| | | ||||| || || | || ||||||||||||||| | || Sbjct 923033 CC--ATGCTTAGCAATTTTCTCCTTCAAAGTGGACCAATTCCAAAGATCTGTTGGCGTTT 922976 Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACC----GTTACTGGCGTACGATCCTACATATGTA 53395 ||| ||||| || | |||||| ||||||| |||| || Sbjct 922975 TATTCCACATATCGTATTGAAGAATTCCTTTAGATACTGG----CGATCCTTCATAAGTC 922920 Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455 ||||| | ||| | ||||| ||||||||||| || || ||||| ||||||||||| Sbjct 922919 TCGTAAGTTCCAAATTCTTCAGCAAGTTCACAACTTGCTTCCAATGCTCCGTAATAAATT 922860 Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATT--TA 53513 ||||| ||||| | || ||| || | |||||||| | ||||| || ||| | Sbjct 922859 GTTTCAAAGATTTGCTGATTAAGTTTCTGTGCTTCGGGAGATTCAAAAGG--CATTCGCA 922802 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | ||| || || || ||||| |||||||| ||||| || || || | ||| | | ||| Sbjct 922801 TCATAATGAAAGCATCAGCTAAGCCTTGAACTCCAATTCCAATGGGACGATGACGCATAT 922742 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG---GT 53630 | || || ||||| |||| ||||| ||||||| || || ||||||||||| | Sbjct 922741 TTGATCGTTTGGCTTCAGGAACTGGATAGTAATTAACGTCAATGATTTTATTGAGATTTT 922682 Query 53631 TTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AAT-----TGTCCAT 53684 || ||||| || |||| ||| ||||| | ||| || ||| ||| ||||| Sbjct 922681 TTGTGACAGTT--TTTG-TCACTTCCTTTAATTTCTTGAAGTCATAATCCTTACTTCCAT 922625 Query 53685 CTATT-------ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737 |||| ||||||||||| | ||||| || || | |||||||| || || ||| Sbjct 922624 -TATTTGCAACGACAAACATGTTGACAGCAATTGAAGCTAAGTTACAAACTGCAACTTCA 922566 Query 53738 --TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 || || | | ||||| | || || ||||| ||||| || || || || | Sbjct 922565 TCTTTGCTT--GAATATTCAACAATTTCTGTGCATAGATTTGAGCAACGAATAGTGCCAA 922508 Query 53796 AATTTTGTTGATTACTCTTTTTG-TTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854 || |||||||| | ||| | || || || || |||||||| ||| | || || ||| Sbjct 922507 CGTTCTGTTGATT-CGATTTGCGATTGCAAGCGTCTTTATAAAGCATGTAAGGAGTTCCA 922449 Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914 ||||||| || || || || ||||| ||| | | |||| || | | || Sbjct 922448 GTTTCAACTTGTGACTCGATGATCGCAAACCAAAGATCTTGAGCTTTCACCTGACGAATG 922389 Query 53915 TATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974 || | ||| ||| ||| | ||| | | || || || || |||||| || | Sbjct 922388 TAACGTCCTTCAGCTTCTTATTTTTCATAAAGTTTCTCGAAATCTTCACCCCAAGTATCG 922329 Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC-ACTCG 54033 || |||| | || ||||||||||| |||||| ||| | | | ||| || || Sbjct 922328 AATAAATTTGGACTGTTATGAGGACACATCAAAGACCACATTCCATTA-CTTTCAACACG 922270 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCT 54092 |||||| | ||| || ||||||||||| ||| || | || | | || | ||| | Sbjct 922269 ACGCATAAACAAATCGGGGATCCAAAGAGC-ATAGAACATGTCACGAGCTCGAGCTTCTT 922211 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | ||||| || || || || | ||| |||||| | | ||| || |||||| ||||| | Sbjct 922210 CTTTTCCAGTGTTTTTCTTCAAATCAAGGAACTCAAAAATGTCGCCATGCCAAGGTTCAA 922151 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 || |||| | | |||| || |||||||| || || || || | || | ||| |||| Sbjct 922150 GATAAATGGCGAAAGCTCCTGGACGTTTGTTGCCACCTTGGTCGACATAACGAGCTGTGT 922091 Query 54213 TATTATAAACTC 54224 | |||||||||| Sbjct 922090 TGTTATAAACTC 922079 >seq64 Length=2694604 Score = 495 bits (548), Expect = 4e-135 Identities = 1237/1876 (66%), Gaps = 36/1876 (2%) Strand=Plus/Minus Query 52788 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 52847 ||| ||| | |||||| | || |||||||| | | | ||| ||||| || || || | Sbjct 2452017 TTAATTTTTGCTTGTCAACAGTAAATTGAATTGCATTTGCTGCTGGTTTTGTTCGAAGGT 2451958 Query 52848 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGG 52907 | |||||||| || || || || | |||| | || ||||| ||| || |||||| Sbjct 2451957 AATACATTCCAGTCTTAAGTCCTTTATTCCAAGCATAGAAATGAATAGACGTGAGTTTGC 2451898 Query 52908 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 52967 |||| | || || || | || ||||| | || || ||||| || || || || | Sbjct 2451897 CATAATTAGGCTCAGCCACGTGAATATTAAACGACTGCGACTGATCAATAAATGCGCCAC 2451838 Query 52968 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CT 53026 || || ||||||| || | |||| || |||||||||| ||| ||||||| || Sbjct 2451837 GATCAGCTGCCATTTGAATTTGCTTCTTGATTGATATTTCCCAAACAGTCTTATAAATCT 2451778 Query 53027 CGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATAGATCCACCATCTACCATAATC 53083 | | | | | ||| |||| | || ||| |||| ||||| | | | ||||| Sbjct 2451777 CACGAACTTT-TTCGGGAATTTCTTCGATTTGTTGAACTGATCCGTTGTGTGCAATAATT 2451719 Query 53084 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 53143 ||||||| || | ||||||||| || || | ||||||| || ||| ||||| | Sbjct 2451718 TTATTCTTCATGTTATCATTCCACAAGTTAAGTTTGGTTAAATCTTTAATAAGATGATGG 2451659 Query 53144 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 53203 || || ||||||||||||||| || |||| ||| |||| | ||||| || || ||| Sbjct 2451658 TTGACAACTTGAAATTCTCCACTTAAAACTCGACGATTGTAGACGTTACTTGTGTATGGT 2451599 Query 53204 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 53263 || | ||||| || || |||||||| || ||||| ||||| ||||| ||||| | Sbjct 2451598 TCGAAGCTTTCATTGTTACCTAAAATTTGGGCTGTTGAAGCAGTTGGCATTGGTGCGATT 2451539 Query 53264 AATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAA 53323 || ||| |||||| | || | | || ||||||| |||| || | ||||| |||| Sbjct 2451538 AACAAAGAATTTCTCACGCCATGTTTTGCGATTTTACTCTTTAAAGTTGACCAATCCCAA 2451479 Query 53324 AGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTA 53379 ||||| | || | ||| ||||| || || ||||| | | Sbjct 2451478 AGATCGGTTGGCGTTTCATTCCACATGTCGAATTGCAGAATTCCTTTCGACACTGGAGAA 2451419 Query 53380 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 53439 | || || || || || | ||| | |||| ||||||||||| || ||||| Sbjct 2451418 C----CTTGGTAAGTCTCATAAGTTCCAAGTTCTTCAGAAAGTTCACAACTTGCTTCTAA 2451363 Query 53440 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA-- 53497 ||| ||| ||||||| || ||||| |||| ||||| || | |||||| |||| Sbjct 2451362 TGCGCCGAAATAAATTGTCTCGAAAATCTGTTTATTAAGTTTACTTGCTTC--GGCTGAT 2451305 Query 53498 TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 53557 ||||| || | | | ||||| || || ||||| |||||||| ||||| || || Sbjct 2451304 TCAAAAGGCATTCTCATCATGATAAATGCATCGGCTAAACCTTGAACTCCAATTCCAATT 2451245 Query 53558 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 53617 |||| ||| | | | || || ||| ||||||||| || |||||| | || | ||| || Sbjct 2451244 GGTCGATGACGCATGTTGGATTTTTTAGCTTCTGGTATTGGATAAAAGTTCACATCGATG 2451185 Query 53618 ATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA- 53676 |||||||| || ||||| | | | ||| | || ||||||| || ||||||| | Sbjct 2451184 ATTTTATTCAGATTTCTTGCTACAATCTTGGCAACTTCCTTCAACTTTTCAAAATCATAC 2451125 Query 53677 -----TTGTCCATCTATT---------ACAAACATGTTCAATGCAATAGATGCCAGATTA 53722 || ||| || || ||||||||||| | || || || |||| |||| Sbjct 2451124 GAAATTTCTCCTTCATTTTTCGTCACAACAAACATGTTTAGAGCTATCGAAGCCAAATTA 2451065 Query 53723 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 53782 ||||| ||||| ||||| || | ||||| | ||||| ||||||||||| ||| Sbjct 2451064 CAAACAGCTACTTCATTTTTATTGGAATATTCAAGAATCTCTGTGCAAAGATTTGAACAA 2451005 Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842 | || ||||| | ||| ||||| || ||| || || ||||| || ||||| ||| Sbjct 2451004 TGAATCGTTCCAAGATTCTGTTGGTTTGATTTTCGATTGCATGCATCTTTGTAAAGCATG 2450945 Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902 | ||||| || ||||| | || || || ||||| || ||| | | | || || Sbjct 2450944 TAAGGCGTTCCCGTTTCCACTTGAGACTCAATAATGGCAAACCAAAGATCTTGTGCTTTA 2450885 Query 53903 ATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCT 53962 ||| | | |||| ||| ||||| ||| || | | ||||| || ||| Sbjct 2450884 ATTTGACGAATATATCGGCCTTCACTTTCATATTTCTCGTAAAGTTTATCAAATTCTTCT 2450825 Query 53963 CCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 54022 |||||||| | |||||| |||| | | ||||||||||| |||||| ||| | | Sbjct 2450824 CCCCAAACTTCAAACAATCCTGGACTGTTGTAGGGACACATCAAAGACCACATTCCATTA 2450765 Query 54023 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTT 54082 || || || |||||| | ||| |||||||||||| | ||| | ||| |||| | Sbjct 2450764 CTCTCAACACGACGCATAAACAAATCTGGAATCCAAAGACCATAAAACATATCCCTGGCT 2450705 Query 54083 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 54142 || || || | ||| ||||| || ||||||| || ||| | | || || |||| Sbjct 2450704 CTTACTTTTTCCTCTCCCGTATTTTTCTTAAGATTCAGAAACTCGAAGATGTCGCCATGC 2450645 Query 54143 CACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 54202 || ||||| | || |||| | | ||||||| ||||| || || | ||| || | || Sbjct 2450644 CATGGTTCAAGATAAATGGCGAAAGCTCCAGGACGTTTATTACCACTCTGGTCAACATAA 2450585 Query 54203 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG--ATGCACCATTGG 54260 | ||||||||| || | |||| |||||| || | || |||||| | ||| ||||| | Sbjct 2450584 CAAGCGGTGTTGTTGAATACTCGCAACATAGGGACAAGACCATTAGCAATG--CCATTTG 2450527 Query 54261 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTG 54320 | || | || || ||||| || || ||||| | || | || || || || | Sbjct 2450526 TGCCTGCAATGTAACTTCCCCTAGCTCGAATGCAATGAACGTTCAATCCAATTCCACCAG 2450467 Query 54321 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 54380 | ||| ||| | || ||| | | | || | | | || || ||| ||| | Sbjct 2450466 CAGATTTGCTGATGAGAGCACATTGGGTGAGTGTGTGGAAAACACCTTCGATAGAATCCT 2450407 Query 54381 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 54440 || ||| ||||||||||| || | ||| | | || ||| | ||| ||| | Sbjct 2450406 CCGACATTGAGAGTAGAAAACAAGACGATAATTGAGGTCTTCTTGTTGCAGCAGCAAAAA 2450347 Query 54441 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTG 54500 || || || || || || || || || || | || |||||| || || || |||| Sbjct 2450346 GTGTTGGCGATGCATGAGTGAAGTATCGTTGTGATAATAAATTGTAAGTTTCAATTGCTG 2450287 Query 54501 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 54560 | || || ||||||||| | || || ||||| |||||||| |||||||| | Sbjct 2450286 CATTAATGTCTGCACCATGAATTCCGATAGCTACTCGCATCAACATGTGTTGAGGTCTCT 2450227 Query 54561 CAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 54620 | || || || || ||||||| ||| || | |||||| ||||| || || |||| Sbjct 2450226 CGACAATTTTCCCTTTAATTTTCAACAAATAACTTCGTTCCAATGTTTTGAATCCGAAAT 2450167 Query 54621 AGTTGTATGAAAAGTC 54636 | ||||| | ||| || Sbjct 2450166 AATTGTAAGCAAAATC 2450151 >seq43 Length=2293527 Score = 210 bits (232), Expect = 3e-49 Identities = 454/672 (68%), Gaps = 13/672 (2%) Strand=Plus/Plus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| ||||| |||||| || || || || |||||||| || || |||||||| || Sbjct 2197271 CATCACTCCAGCTTTTTGATACTCTCCAACTTTCTTTTCGAAGAAGTTTGTTTTACCCTC 2197330 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 | || || |||||||| | | ||||| | || |||||| ||| | ||| Sbjct 2197331 AAGCGAGATGAGCTCCATGAAGCTGAAAGGATTCTTTGTGTTGTAGATTTTTTCGACTCC 2197390 Query 23951 CAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATT 24010 ||||||| | | | ||| || |||||||| || ||| ||||| ||| ||||| Sbjct 2197391 CAATTCACCGAGAAGACGATCAGCAACAAACTCAATGTATTGAGACATCAGTTCGCAATT 2197450 Query 24011 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 24070 ||| || | | ||||| || | || | || || |||||||||||||| || || Sbjct 2197451 CATGCCCAACATGTTAACAGGCAAGGCATCGGTGAGGAATTCTTGTTCAATTTTAACAGC 2197510 Query 24071 GTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA---AA 24127 |||| || || || || || ||| | ||||| | | | | | | | || Sbjct 2197511 TTCTGAAATGATT--TCG-ACAATTCGTTCTTTTGGTGGTTTCTGGACAAGATGACGGAA 2197567 Query 24128 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 24187 ||||||||| || ||||| || || | || ||||| | ||| ||||| |||||||| Sbjct 2197568 CATCAAACAAGCAAAATCACAATGCAAGCCTTCGTCACGTGAAATCAATTCATTGGAAAA 2197627 Query 24188 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 24247 || | ||| ||||| | ||||| || |||| ||||||||||| ||||| |||| Sbjct 2197628 TGTCAATCCCGGCATCAATCCACGTTTCTTAATCCAAAATATGGCAGCAAAACTTCCACT 2197687 Query 24248 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTC 24307 |||||||||||||| ||||| ||||| ||||||| |||||| ||| | ||| | | Sbjct 2197688 GAAGAAAATTCCTTCAACTGCTGCAAATGCAATAATTCTTTCCCCAAAGTTGGCATTCTT 2197747 Query 24308 A-TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364 | || ||||| || ||||| || |||||||| || ||||| |||| ||| || | Sbjct 2197748 ACTGCTGATCCAGTTAATTGCCCAGTCAGCCTTCTTCTTCACACATGGCAATGTTTCGAC 2197807 Query 24365 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGA 24422 ||| || || | | | | || || | | || || || ||||| | || || Sbjct 2197808 AGCGTTGAATAAAAATTCACGCTCTTTGGAGTTTCGAATGTAAGTTTCAATAAGCAAGGA 2197867 Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 ||||||||| ||||| | || || || || |||||||| || || || || | || Sbjct 2197868 --ATACATTTCAGAATGTACATTCTCCATAGCTATTTGAAAACCATAAAAGCAGCGTGCT 2197925 Query 24483 TCGGTAATCTGT 24494 || |||| |||| Sbjct 2197926 TCAGTAACCTGT 2197937 Score = 102 bits (112), Expect = 1e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565 ||||| ||| |||||||||||||||| || |||||| |||||||| || |||||||| Sbjct 2198008 AAATCTTTCAACTAAATTTTCATTCACGATGCCGTCAGATGCTGCAAAGAATGCCAATAC 2198067 Query 24566 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGA 24625 |||| ||||| | |||| | | || |||||||| || | ||| || || Sbjct 2198068 ATGTGAGATAAAGTGACGTTCGGTATCTTTAAGGCCATTCCAATGATCAAGATCCTTTGA 2198127 Query 24626 TATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669 | ||| |||||||| || ||||||||||| || || |||| || Sbjct 2198128 CAGATCAACTTCTTCAACCGTCCAAAATGACGCTTCCGCCTATT 2198171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593545242420240