Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq48 91.5 1e-13 >seq48 Length=1955607 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| |||||||||||||||| |||||||| ||| || ||||| Sbjct 847391 AACATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAACCA 847450 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | || | || ||| ||| ||||||||||| | || |||| Sbjct 847451 TCGGATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAGAT 847510 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || ||| | | ||||| || || || ||| | || ||| ||| | ||||||| Sbjct 847511 CAGCAACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATTAC 847570 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || || ||||| || || || ||||| ||||||| || Sbjct 847571 AACATCCAGAAAGAGTCAACACTTCATTTGGTGTTGCG 847608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428211948941765