Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq48 96.9 3e-15 seq37 84.2 2e-11 >seq48 Length=1955607 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||||||||||||||| |||||||| ||| || ||||| Sbjct 847391 AACATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAACCA 847450 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | | || |||| ||| ||| ||||||||||| | || |||| Sbjct 847451 TCGGATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAGAT 847510 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || ||| | | ||||| || || || ||||| || ||| ||| | ||||||| Sbjct 847511 CAGCAACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATTAC 847570 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || || || || || || ||||| ||||||| || Sbjct 847571 AACATCCAGAAAGAGTCAACACTTCATTTGGTGTTGCG 847608 >seq37 Length=1894237 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||| ||||| ||||| || || || ||| ||||| || Sbjct 798938 ATGCAAATCTTCGTTAAAACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAACCATCA 798879 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| ||| || || || ||||| | ||| |||||| Sbjct 798878 GACACCATTGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCAG 798819 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || || ||| | |||||| | ||| || ||| ||||| Sbjct 798818 CAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGCCGCACTTTGAGCGACTACAAC 798759 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||||||||||| ||| | || |||| Sbjct 798758 ATTCAAAAGGAATCAACTTTGCATTTGGT 798730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410677828496882