Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq63 158 1e-33 >seq63 Length=2199633 Score = 158 bits (174), Expect = 1e-33 Identities = 301/438 (69%), Gaps = 4/438 (1%) Strand=Plus/Minus Query 20196 TGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACA 20255 ||||||| | ||||| | || |||||||| || || ||||| ||||| ||| | || Sbjct 1194304 TGGATTTCCACATCGTCAGGTTGGTGATTTGGGACCAGTTTATGGCTTTCAGTGGCGTCA 1194245 Query 20256 TTTTGGAGCTGAATATGTTGACATGAACACAA-ATTATTTTGGACAAGGAGTAGATCAAT 20314 |||||| |||||||||| ||||| | | |||| ||| ||||| | || ||| Sbjct 1194244 TTTTGGTGCTGAATATGGC-ACATGCAATGATGATTACACTGGTAAAGGAATCGACCAAC 1194186 Query 20315 TACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCG 20374 | | | ||||| | |||||||| || || | ||| | | ||||| | | Sbjct 1194185 TGAAGGAAGTTATCGAACGAATTAAAAGAAATCCCACTGACCGTCGCATTATCATGACAG 1194126 Query 20375 CCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAA 20433 | ||||| | | | | || ||||| ||||| || |||||| |||| | ||| Sbjct 1194125 CTTGGAATCCAATTCAGATTCCCGACATGGCATTGCCACCTTGTCAT-TGCTTGGTGCAA 1194067 Query 20434 TTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 ||||| || ||| || ||| | |||||| |||| ||||| || ||||| ||||| Sbjct 1194066 TTTTATGTCGCTGATGGTGAGCTTAGTTGTCAATTGTACCAACGTTCAGCTGACATGGGT 1194007 Query 20494 CTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 || |||||||||||||| ||||| |||||| | || || || |||||||| ||||| Sbjct 1194006 CTTGGTGTTCCTTTCAACATTGCTTCTTATGCTTTACTCACTTACATGATTGCTCATGTC 1193947 Query 20554 ACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613 || || | |||| || || || | || || | || || |||||| ||||| | ||| Sbjct 1193946 ACGAATCTTAAAATTGGCGATTTTATTCATACACTCGGCGATGCGCATGTTTACTTGAAT 1193887 Query 20614 CATATAGAACCTTTAAAA 20631 ||||| || || || ||| Sbjct 1193886 CATATTGAGCCATTGAAA 1193869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399068391698035