Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq48 104 2e-17 seq37 95.1 1e-14 >seq48 Length=1955607 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| |||| || ||||| || |||||||||||| ||| |||| | || || Sbjct 646258 ACCAAATGCAAAGTTGATTCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCG 646199 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || ||||| ||||| || || ||||| ||||| | || |||||||| Sbjct 646198 AGTTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGG 646139 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| |||||| | | | | |||| || ||||| | ||| || |||||| Sbjct 646138 ATCTTTGCCTTAACATTCTCAATGGTGTCGGATGGTTCAACCTCAAGGGTGATGGTCTTG 646079 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||| ||| || || |||||||||||| Sbjct 646078 CCAGTCAAAGTTTTGACGAAGATTTGCATG 646049 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| |||| || || || || |||||||||||| ||| |||| | || || Sbjct 647170 ACCAAATGCAAAGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCG 647111 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||| ||||| ||||| || || ||||| || || | || |||||||| Sbjct 647110 AGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 647051 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| |||||| | | | | |||| || ||||| | ||| || |||||| Sbjct 647050 ATCTTTGCCTTAACATTCTCAATGGTGTCGGATGGTTCAACCTCAAGGGTGATGGTCTTG 646991 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||| ||| || || |||||||||||| Sbjct 646990 CCAGTCAAAGTTTTGACGAAGATTTGCATG 646961 >seq37 Length=1894237 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| |||| || || || || |||||||||||| ||| |||| | || || Sbjct 798502 ACCAAATGCAAAGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCG 798561 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||| ||||| ||||| || || ||||| || || | || |||||||| Sbjct 798562 AGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 798621 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| |||||| | | | | |||| || ||||| | || || |||||| Sbjct 798622 ATCTTTGCCTTAACATTCTCAATGGTGTCAGATGGTTCAACCTCAAGAGTGATGGTCTTG 798681 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||| ||| || || |||||||||||| Sbjct 798682 CCAGTCAAAGTTTTGACGAAGATTTGCATG 798711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394960781654023