Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq43 250 2e-61 seq4 84.2 2e-11 >seq43 Length=2293527 Score = 250 bits (276), Expect = 2e-61 Identities = 481/706 (68%), Gaps = 10/706 (1%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTT 13915 ||||||||| |||| | | |||||||| || || | || || || |||| Sbjct 2197227 TAAAAATCAGCATCAAGTGTGAAAACATTGTCAAGACGATTTGCCATCACTCCAGCTTTT 2197286 Query 13916 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13975 ||||| || | |||| | ||||| |||||||| |||||||| || || || || ||| Sbjct 2197287 TGATACTCTCCAACTTTCTTTTCGAAGAAGTTTGTTTTACCCTCAAGCGAGATGAGCTCC 2197346 Query 13976 ATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAAT 14035 || || || ||||| ||| | | | ||| || || | ||| || | Sbjct 2197347 ATGAAGCTGAAAGGATTCTTTGTGTTGTAGATTTTTTCGACTCCCAATTCACCGAGAAGA 2197406 Query 14036 CTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTT 14095 | ||| |||| |||||||| ||||||||||| | || |||||||| || | | || Sbjct 2197407 CGATCAGCAACAAACTCAATGTATTGAGACATCAGTTCGCAATTCATGCCCAACATGTTA 2197466 Query 14096 ACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATC 14155 ||||| | || ||| | ||||||| ||| || ||||| || || || || Sbjct 2197467 ACAGGCAAGGCATCGGTGAGGAATTCTTGTTCAATTTTAACAGCTTCTGAAATGATT-TC 2197525 Query 14156 GT-AATAATTTCATTAGAAGGA----GGATATTTTAGATGTTTAAAAATTAAACACGCAA 14210 | ||| ||| || | || ||| | ||||| || || ||||| |||| Sbjct 2197526 GACAATTCGTTCTTTTGGTGGTTTCTGGACA----AGATGACGGAACATCAAACAAGCAA 2197581 Query 14211 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 14270 |||||||||| | ||| || || | ||| | ||| || |||||||| ||||| |||| Sbjct 2197582 AATCACAATGCAAGCCTTCGTCACGTGAAATCAATTCATTGGAAAATGTCAATCCCGGCA 2197641 Query 14271 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 14330 ||||||| ||||| || | ||||||||| ||||| || ||| ||||| ||||| | Sbjct 2197642 TCAATCCACGTTTCTTAATCCAAAATATGGCAGCAAAACTTCCACTGAAGAAAATTCCTT 2197701 Query 14331 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATT 14390 ||||||| ||||| || || | || ||| ||||| || || || | ||||| | Sbjct 2197702 CAACTGCTGCAAATGCAATAATTCTTTCCCCAAAGTTGGCATTCTTACTGCTGATCCAGT 2197761 Query 14391 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAAT 14450 | | ||||| |||| || || || | | | || |||||| | ||| || |||||| Sbjct 2197762 TAATTGCCCAGTCAGCCTTCTTCTTCACACATGGCAATGTTTCGACAGCGTTGAATAAAA 2197821 Query 14451 GTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGT 14510 ||| |||||| | || |||||| || |||||||| ||| |||||||||||| | Sbjct 2197822 ATTCACGCTCTTTGGAGTTTCGAATGTAAGTTTCAATAAGCAAGGAATACATTTCAGAAT 2197881 Query 14511 GTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14556 ||| || ||||||||||| |||||||||||||| || | ||||| Sbjct 2197882 GTACATTCTCCATAGCTATTTGAAAACCATAAAAGCAGCGTGCTTC 2197927 >seq4 Length=2116169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/131 (76%), Gaps = 5/131 (4%) Strand=Plus/Minus Query 139648 TATATTGGAAGCGCTAATATGGATTGGAGGTCTCTTTCTCAAGTTAAAGAACTTG--GTA 139705 ||| ||||||| || |||||||||||| | || | || |||||||||||||||| ||| Sbjct 838667 TATGTTGGAAGTGCAAATATGGATTGGCGTTCATTGTCACAAGTTAAAGAACTTGGTGTA 838608 Query 139706 TAGGTATCTACAATTCTTCATGTTTGGTAATGGATTTAATAAAAATCTTTAATGAATATT 139765 | |||| | || | ||||||| | | | ||||||| ||| ||||| |||| |||| Sbjct 838607 TTGGTAAC--GAACTGTTCATGTCTTGCCAGTGATTTAACAAAGATCTTCAATGTTTATT 838550 Query 139766 GTTATATTGGG 139776 | || ||||| Sbjct 838549 GGGAT-TTGGG 838540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482202325268840