Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq43 201 2e-46 >seq43 Length=2293527 Score = 201 bits (222), Expect = 2e-46 Identities = 350/505 (69%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGAT--GCA--AAGCAATAACGATTTGGCGGA 101910 |||||||||| | ||||| ||||| ||||| ||| ||| ||| | | || | ||| Sbjct 2197786 AAGAAGAAGGCTGACTGGGCAATTAACTGGATCAGCAGTAAG-AATGCCAACTTTGGGGA 2197728 Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970 | |||| |||| ||||| |||||||||||||| ||||| ||||| || || |||| Sbjct 2197727 AAGAATTATTGCATTTGCAGCAGTTGAAGGAATTTTCTTCAGTGGAAGTTTTGCTGCCAT 2197668 Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030 || ||||| ||||| | || | |||| || | || | |||||||| || ||||| Sbjct 2197667 ATTTTGGATTAAGAAACGTGGATTGATGCCGGGATTGACATTTTCCAATGAATTGATTTC 2197608 Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA 102090 | |||||||| | ||| | || ||||| || || |||| | | |||| | Sbjct 2197607 ACGTGACGAAGGCTTGCATTGTGATTTTGCTTGTTTGATGTTCCGTCA---TCTTGTCCA 2197551 Query 102091 TACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150 | ||| ||| |||| | ||| | ||||| | | ||||| || |||||||||||| Sbjct 2197550 GAAACCACCAAAAGAACGAATTGTCGAAATCATTTCAGAAGCTGTTAAAATTGAACAAGA 2197491 Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 ||| ||||| | | || |||||||||| | |||| ||||| ||| | ||||| || Sbjct 2197490 ATTCCTCACCGATGCCTTGCCTGTTAACATGTTGGGCATGAATTGCGAACTGATGTCTCA 2197431 Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270 |||||||| ||||| || ||| || | | |||| ||||| | ||||| ||| || Sbjct 2197430 ATACATTGAGTTTGTTGCTGATCGTCTTCTCGGTGAATTGGGAGTCGAAAAAATCTACAA 2197371 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330 | || || ||| |||||||| || || || ||| ||| || ||||| || Sbjct 2197370 CACAAAGAATCCTTTCAGCTTCATGGAGCTCATCTCGCTTGAGGGTAAAACAAACTTCTT 2197311 Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355 ||||||| ||| | ||||||||| Sbjct 2197310 CGAAAAGAAAGTTGGAGAGTATCAA 2197286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989282707853665