Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq1500 122 2e-23 >seq1500 Length=623 Score = 122 bits (134), Expect = 2e-23 Identities = 75/80 (94%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| Sbjct 458 TGGTGGGTCGTGAAGGGCTCGAACCTTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 399 Query 418 ACTGAGCTAACGACCCAATT 437 |||||||||||||||||||| Sbjct 398 ACTGAGCTAACGACCCAATT 379 Score = 120 bits (132), Expect = 6e-23 Identities = 72/76 (95%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 358 TGGTGGGTCGTGAAGGACTCGAACCTTCGACCAACGGATTAAAAGTCCGATGCTCTACCA 299 Query 418 ACTGAGCTAACGACCC 433 ||||||||||||||| Sbjct 298 CCTGAGCTAACGACCC 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100675582778820