Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq55 86.0 5e-12 >seq55 Length=2529122 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 42946 GTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACA 43005 ||||| |||| || ||||| || || ||||| ||||| || || ||||| | || | | Sbjct 2062064 GTACGACCGTCTTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATA 2062005 Query 43006 CCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCT 43065 ||||| || || |||| | ||||| | ||| ||| || | |||||| || Sbjct 2062004 CCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATTGTATCTGATGGCTCGACTTCG 2061945 Query 43066 ACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 | || ||||| || || || ||||||||||| || ||||||||||| Sbjct 2061944 AGAGTGATAGTCTTGCCAGTGAGAGTTTTCACGAAGATTTGCATTTT 2061898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381259150954254