Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq4 122 5e-23 >seq4 Length=2116169 Score = 122 bits (134), Expect = 5e-23 Identities = 194/275 (71%), Gaps = 10/275 (4%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || || |||||||||||||| || || || || ||||| || ||||||||||| ||| Sbjct 1942750 GGAGTTCACTTTATGATGGCTGATGGAGGTTTTTCAGTTGAAGGACAAGAAAATATTCAA 1942691 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGA----TGATCAT 3990 || || |||| || || | ||| | || || | ||||||| | || || | Sbjct 1942690 GAGATTCTATCAAAGCAGTTATATCTCGCACAGTGCCTCGTTGCATTAACAATTGTTCGT 1942631 Query 3991 ACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTG- 4049 ||||| || |||| |||| | ||| |||| || | || ||||||||||||| | Sbjct 1942630 ACGAAA----GGACATTTTGTTGTGAAACTTTTTGACCTTTTCACACCTTTTAGTGTTTC 1942575 Query 4050 GTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCAT 4109 | ||| | ||||||||||| | | ||| | | |||| |||| ||||||| || || Sbjct 1942574 GCTTATT-TATTTGATGTACAAAAGTTTCCAACAAATTTCAATTTGCAAACCAAATACAA 1942516 Query 4110 CGCGACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 || || || ||||||||| | ||| | |||||| Sbjct 1942515 GTCGTCCAGCAAATTCTGAACGTTATCTCGTGTGT 1942481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276473506879789