Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28]
23,763 sequences; 85,491,412 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq69 201 2e-47
>seq69
Length=291459
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| |||||||| ||||| ||
Sbjct 248809 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGCATCACCAAACCAGCAATT 248750
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | ||||| |||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 248749 CGTCGTTTAGCTCGACGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 248690
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 248689 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 248631
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 248630 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 248571
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 248570 CCGCACACTTTATGGTTTCGGAGGTTAA 248543
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| ||||| || ||||| ||
Sbjct 254144 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGTATCACAAAACCAGCAATT 254085
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | |||||||||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 254084 CGTCGTTTAGCTCGTCGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 254025
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 254024 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 253966
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 253965 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 253906
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 253905 CCGCACACTTTATGGTTTCGGAGGTTAA 253878
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| |||||||| ||||| ||
Sbjct 265676 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGCATCACCAAACCAGCAATT 265617
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | ||||| |||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 265616 CGTCGTTTAGCTCGACGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 265557
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 265556 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 265498
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 265497 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 265438
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 265437 CCGCACACTTTATGGTTTCGGAGGTTAA 265410
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| |||||||| ||||| ||
Sbjct 271005 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGCATCACCAAACCAGCAATT 270946
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | ||||| |||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 270945 CGTCGTTTAGCTCGACGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 270886
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 270885 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 270827
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 270826 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 270767
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 270766 CCGCACACTTTATGGTTTCGGAGGTTAA 270739
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| ||||| || ||||| ||
Sbjct 277513 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGTATCACAAAACCAGCAATT 277454
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | |||||||||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 277453 CGTCGTTTAGCTCGTCGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 277394
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 277393 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 277335
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 277334 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 277275
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 277274 CCGCACACTTTATGGTTTCGGAGGTTAA 277247
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| |||||||| ||||| ||
Sbjct 283140 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGCATCACCAAACCAGCAATT 283081
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | ||||| |||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 283080 CGTCGTTTAGCTCGACGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 283021
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 283020 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 282962
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 282961 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 282902
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 282901 CCGCACACTTTATGGTTTCGGAGGTTAA 282874
Score = 197 bits (218), Expect = 2e-46
Identities = 206/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| || ||||| | | |||||| |||||||||||||| |||||||| ||||| ||
Sbjct 260337 GCTAAACGACATCGTAAAGTTCTTCGTGATAACATCCAAGGCATCACCAAACCAGCAATT 260278
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | ||||| |||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 260277 CGTCGTTTAGCTCGACGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 260218
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 260217 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 260159
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 260158 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 260099
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 260098 CCGCACACTTTATGGTTTCGGAGGTTAA 260071
Score = 197 bits (218), Expect = 2e-46
Identities = 206/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| |||||||||||||| ||||| || ||||| ||
Sbjct 288581 GCTAAACGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGTATCACAAAACCAGCAATT 288522
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | ||||| |||||||| ||||| ||| | ||||| || | |||||||| |
Sbjct 288521 CGTCGTTTAGCTCGACGTGGTGGTGTCAAACGTATTTCTGGGTTAATTTATGAAGAAACC 288462
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|| | || || || | ||| | | | || || | ||||||| || || || || ||
Sbjct 288461 CGAGGCGTCTTAAAAGTTTTCTTGGAAAATGTAATTCGTGATGCTGTTACA-TACACTGA 288403
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | ||||||||||| | |||||| |||||||||||||||||||||||||
Sbjct 288402 ACATGCTAAGAGAAAGACTGTCACTGCTATGGATGTCGTCTATGCATTGAAACGTCAAGG 288343
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||||||||| ||| |||||
Sbjct 288342 CCGCACACTTTATGGTTTCGGAGGTTAA 288315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79053473322759
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