Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq67 188 1e-42 >seq67 Length=1615038 Score = 188 bits (208), Expect = 1e-42 Identities = 357/523 (68%), Gaps = 2/523 (0%) Strand=Plus/Minus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 ||||| || ||| | | ||| ||| ||||| ||| |||| ||||| | |||| ||| Sbjct 293240 GAGATTTACAATTTAGCTGCACAATCGCATGTGAAAATTTCTTTTGATTTATCAGAATAT 293181 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || | | ||||| | | | |||||| | | ||||||| || | | | | ||| Sbjct 293180 ACAGCAGAAGTTGACGGTGTTGGAACTTTGCGCTTACTTGATGCGATAAGAACTTGTGGA 293121 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 |||| ||| | ||| | ||||| ||||||||| || || ||||| || | Sbjct 293120 CTGGAAAAACAAGTTAAATTTTATCAAGCATCTACCTCAGAGCTTTATGGGAAAGTCGTT 293061 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGG-TGTAGCAAA 193885 | || |||| | | |||| || || || ||||| | |||||||||| ||| || || Sbjct 293060 GAAACGCCACAAACTGAAAAAACTCCTTTCTATCCAAGATCTCCTTATGCATGT-GCCAA 293002 Query 193886 GTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTC 193945 | ||||||| | |||||| | | |||||||| || |||| | | ||| | Sbjct 293001 GATGTATGGATTTTGGATTGTGATAAATTATCGAGAAGCATACGATATGTTTGCTTGCAA 292942 Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||||||||| || ||||||||||| ||||| ||||| || | || || ||| | || || Sbjct 292941 TGGTATTCTTTTTAATCACGAATCACCAAGGAGAGGAGAAAATTTCGTCACTAGAAAAAT 292882 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCT 194065 |||| | | | | || || ||| | | |||| | ||||| | ||||| ||||| Sbjct 292881 TACAAGAACTGTCGCCAAAATATCTTTAAAACAACAGGAAGTTCTTGAACTTGGAAATCT 292822 Query 194066 TAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTT 194125 | || | ||| | |||||||| || || | || ||||| ||||| |||||| | ||||| Sbjct 292821 TGATTCAAAGCGCGATTGGGGGCATGCCAGAGACTATGTCGAAGCAATGTGGATGATGTT 292762 Query 194126 GCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 |||| ||| | || || |||| || ||||| ||||| ||| Sbjct 292761 GCAATTGGAAAAGCCAGAAGATTTCGTCATTGCAACAGGAGAA 292719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807315325822280