Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq43 156 4e-33 >seq43 Length=2293527 Score = 156 bits (172), Expect = 4e-33 Identities = 342/507 (67%), Gaps = 13/507 (3%) Strand=Plus/Plus Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATT 21184 ||||||||||||||||| | || ||||||||| || |||| ||| | ||| | Sbjct 2197224 ATTTAAAAATCAGCATCAAGTGTGAAAACATTGTCAAGACGATTTGCCATCACTCCAGCT 2197283 Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||| || | |||| | |||||||| || ||||| || || || | || || Sbjct 2197284 TTTTGATACTCTCCAACTTTCTTTTCGAAGAAGTTTGTTTTACCCTCAAGCGAGATGAGC 2197343 Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCT--GATA 21302 ||||| || || ||||| | | || | ||||| | |||| ||| || | Sbjct 2197344 TCCATGAAGCTGAAAGGATTCTTTGTGTTGTAGATTTTTTCGACTCCCAATTCACCGAGA 2197403 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 | | | ||| || ||||| || || |||||| |||| | ||| |||||||| || | || Sbjct 2197404 AGA--CGATCAGCAACAAACTCAATGTATTGAGACATCAGTTCGCAATTCATGCCCAACA 2197461 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422 || ||||| | || | || | || || ||| || || ||||| ||| | Sbjct 2197462 TGTTAACAGGCAAGGCATCGGTGAGGAATTCTTGTTCAATTTTAACAGCTTCTGAAATGA 2197521 Query 21423 TATTTATTATCCTAGATGTACTAGGGGGAT----ACAATAATTGTTTAAACATCAAACAT 21478 | | | || | | | | | | || | |||| | || ||||||||||| Sbjct 2197522 TTTCGACAATTC--GTTCTTTTGGTGGTTTCTGGACAAGA--TGACGGAACATCAAACAA 2197577 Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538 ||||||||||||||||| ||||| || | || |||||||| |||||||| || || Sbjct 2197578 GCAAAATCACAATGCAAGCCTTCGTCACGTGAAATCAATTCATTGGAAAATGTCAATCCC 2197637 Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598 ||||| ||||| | || || | ||||||||| | ||||| ||| |||||||| Sbjct 2197638 GGCATCAATCCACGTTTCTTAATCCAAAATATGGCAGCAAAACTTCCACTGAAGAAAATT 2197697 Query 21599 CCCTCAACGGCAGCAAATGCAACTAAT 21625 || ||||| || |||||||||| |||| Sbjct 2197698 CCTTCAACTGCTGCAAATGCAA-TAAT 2197723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531742805516120