Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq48 109 5e-19 seq37 102 7e-17 seq55 91.5 1e-13 seq889 87.8 2e-12 >seq48 Length=1955607 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || |||||||| || || ||| | || ||| | || || || | Sbjct 847390 CAACATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAA-C 847448 Query 24047 CAACG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || || | || || ||| | |||||| ||||||| || ||||||||||| || || | Sbjct 847449 CATCGGATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAG 847508 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| || | |||| | || || |||||| | || |||| | | | ||||||| Sbjct 847509 ATCAGCAACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATT 847568 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 | ||||| || ||||| || ||| ||||||| ||||| Sbjct 847569 ACAACATCCAGAAAGAGTCAACACTTCATTTGGTGTT 847605 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || ||| | |||||||| ||| | Sbjct 646506 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTCGAA-CCATC 646564 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | ||||| |||||| || || ||||| || || || || || Sbjct 646565 TGACACCATCGAAAACGTCAAGGCAAAGATCCAAGATAAGGAAGGAATTCCCCCAGACCA 646624 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || || |||||||||||||||| | | | ||||| || || Sbjct 646625 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 646684 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||||||||| || | ||||| || Sbjct 646685 CATTCAAAAAGAATCAACTTTGCATTTGGT 646714 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | || ||| | ||||| || ||| | Sbjct 645822 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGAAGTTGAA-CCATC 645880 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | |||||| || || ||||| ||||| || ||||| ||||| Sbjct 645881 TGACACCATCGAAAACGTCAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCA 645940 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || || |||||||||||||||| | | | | ||||| || || Sbjct 645941 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGCCGCACTTTGAGCGACTACAA 646000 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||| ||||| || | ||||| || Sbjct 646001 CATCCAAAAGGAATCAACTTTGCATTTGGT 646030 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || ||| | |||||||| ||| | Sbjct 647190 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTCGAA-CCATC 647248 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | |||||| || || ||||||||||| || || || || || Sbjct 647249 TGACACCATCGAAAACGTCAAAGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCA 647308 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || ||||||||||||||||||| | | | ||||| || || Sbjct 647309 GCAACGTTTGATCTTCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 647368 Query 24170 CATTCAAAAAGA 24181 ||| |||||||| Sbjct 647369 CATCCAAAAAGA 647380 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || ||| | || || || | | Sbjct 646050 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAGGTTGAACCATCC 646109 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || |||||| ||||| ||||| || ||||| || || Sbjct 646110 GACACCATTGAGAATGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCTCCAGACCAG 646169 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | || ||||||||||||||||||| | | | ||||| || ||| Sbjct 646170 CAACGTTTGATCTTCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAAC 646229 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| ||||| || | ||||| || Sbjct 646230 ATCCAAAAGGAATCAACTTTGCATTTGGT 646258 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||| || || || | || ||| | |||||||| ||| | Sbjct 622220 ATGCAAATCTTCGTCAAAACATTGACCGGCAAGACCATCACCCTTGAAGTCGAA-CCATC 622162 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | ||||| ||||| ||||| ||||| || || || || || Sbjct 622161 TGACACGATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 622102 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| || || |||||||||||||||| | | | ||||| || || Sbjct 622101 GCAACGTTTGATTTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 622042 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||||||||| || | ||||| || Sbjct 622041 CATCCAAAAAGAATCAACTTTGCATTTGGT 622012 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || || | ||||| || ||| | Sbjct 645594 ATGCAAATCTTCGTTAAAACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAA-CCATC 645652 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | ||||| |||||| ||||| ||||| || || || || || Sbjct 645653 AGACACCATTGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCA 645712 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || || |||||||||||||||| | | | ||||| || || Sbjct 645713 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGGCGCACTTTGAGCGACTACAA 645772 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||||||||| || | ||||| || Sbjct 645773 CATTCAAAAAGAATCAACTTTGCATTTGGT 645802 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||| || || || | || ||| | |||||||| ||| | Sbjct 646278 ATGCAAATCTTCGTCAAAACATTGACCGGCAAGACCATCACCCTTGAAGTCGAA-CCATC 646336 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | || || ||||| ||||| ||||| || || || || || Sbjct 646337 TGACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 646396 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| || || |||||||||||||||| | | | ||||| || || Sbjct 646397 GCAACGTTTGATTTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 646456 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||||||||| || | ||||| || Sbjct 646457 CATCCAAAAAGAATCAACTTTGCATTTGGT 646486 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | || || ||||| || || || || | || ||| | |||||||| | Sbjct 622452 CAGAATGCAAATTTTCGTCAAAACTTTGACCGGCAAGACTATCACCCTTGAAGTCGAA-C 622394 Query 24047 CAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || | |||||||| || | ||||| |||||| ||||| ||||| || || || | Sbjct 622393 CATCTGACACCATTGAAAACGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCAG 622334 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 | || || | |||| | || || |||||||||||||||| | | | ||||| | Sbjct 622333 ACCAGCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACT 622274 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | ||||| ||||| ||||| || | ||||| || Sbjct 622273 ACAACATCCAAAAGGAATCAACTTTGCATTTGGT 622240 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || ||| | || || || | | Sbjct 646962 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAGGTTGAACCATCC 647021 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || |||||| ||||| ||||| || || || || || Sbjct 647022 GACACCATTGAGAATGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 647081 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | || || |||||||||||||||| | | | ||||| || ||| Sbjct 647082 CAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAAC 647141 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||||||||| || | ||||| || Sbjct 647142 ATCCAAAAAGAATCAACTTTGCATTTGGT 647170 >seq37 Length=1894237 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || || | ||||| || ||| | Sbjct 798938 ATGCAAATCTTCGTTAAAACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAA-CCATC 798880 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | ||||| |||||| ||||| ||||| || || || ||||| Sbjct 798879 AGACACCATTGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCA 798820 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || || |||||||||||||||| | | | | ||||| || || Sbjct 798819 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGCCGCACTTTGAGCGACTACAA 798760 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||| ||||| || | ||||| || Sbjct 798759 CATTCAAAAGGAATCAACTTTGCATTTGGT 798730 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || ||| | |||||||| ||| | Sbjct 798482 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTCGAA-CCATC 798424 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | ||||| |||||| || || ||||| || || || || || Sbjct 798423 TGACACCATCGAAAACGTCAAGGCAAAGATCCAAGATAAGGAAGGAATTCCCCCAGACCA 798364 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | ||| | || || |||||||||||||||| | | | ||||| || || Sbjct 798363 GCAACGTTTGAACTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 798304 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||| ||||| ||| | ||||| || Sbjct 798303 CATCCAAAAGGAATCAACATTGCATTTGGT 798274 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || || | || || || ||| | Sbjct 798710 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACTCTTGAGGTTGAA-CCATC 798652 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | || || |||||| ||||| ||||| || || || || || Sbjct 798651 TGACACCATTGAGAATGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCA 798592 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || || |||||||||||||||| | | | ||||| || || Sbjct 798591 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 798532 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||||||||| || | ||||| || Sbjct 798531 CATCCAAAAAGAATCAACTTTGCATTTGGT 798502 >seq55 Length=2529122 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/226 (70%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 23976 TTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATC 24035 |||||| || |||||||||| | || || ||||| | ||||| || | || || || Sbjct 2061887 TTTTAGG-AATCAAAATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACTATCACTCTC 2061945 Query 24036 GAAGTCGAGGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 24094 |||||||| |||| | || || || || | ||||| ||||| ||||| ||||| Sbjct 2061946 GAAGTCGA-GCCATCAGATACAATTGAAAATGTCAAGGCTAAGATCCAAGACAAGGAAGG 2062004 Query 24095 CATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAA 24154 || ||||| ||||| || | |||| | | || |||||| | ||||| | | | Sbjct 2062005 TATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAAAGCAATTAGAAGACGGTCGTAC 2062064 Query 24155 CGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | || || ||||||||||| || ||||| ||| ||||| | ||| Sbjct 2062065 TCTTAGTGACTATAACATTCAGAAGGAATCCACACTTCATCTTGTG 2062110 >seq889 Length=890 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | || || | ||||| || ||| | Sbjct 88 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAA-CCATC 146 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | ||||||| || | |||||| ||||| ||||| ||||| || || || || || Sbjct 147 GGACACCATTGAAAACGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCA 206 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||| | || || |||||||||||||||| | | | ||||| || || Sbjct 207 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 266 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||| ||||| || | ||||| || Sbjct 267 CATTCAAAAGGAATCAACTTTGCATTTGGT 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429811485563265