Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq48 86.0 5e-12 >seq48 Length=1955607 Score = 86.0 bits (94), Expect = 5e-12 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || |||||||| || |||||||| | ||||| |||||||| ||| | || || || Sbjct 847391 AACATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAA-CC 847449 Query 115343 AGCG-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | || | || ||| | || ||| ||| ||| |||||||||||| | || || Sbjct 847450 ATCGGATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAGA 847509 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GACAAAACCATGGCCGATT 115460 ||||||| | | || | || || || |||||||| ||| ||| | | | | ||||| Sbjct 847510 TCAGCAACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAG-CGATT 847568 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 | ||||| || |||||||| || | ||| |||||||| Sbjct 847569 ACAACATCCAGAAAGAGTCAACACTTCATTTGGTGTTG 847606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425220815459560