Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq35 98.7 2e-15 seq21581 96.9 7e-15 seq123 96.9 7e-15 seq37 93.3 9e-14 >seq35 Length=1012892 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||| ||||| | ||||||||||||| | |||||||||||||| Sbjct 836153 TAGCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 836094 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 836093 GCCCCACGTTGGGC 836080 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||||| Sbjct 835132 AGCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 835191 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 835192 CCCCACGTTGGGC 835204 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||| ||||| | ||||||||||||| | |||||||||||||||| Sbjct 835793 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 835734 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 835733 CCCACGTTGGGC 835722 >seq21581 Length=101 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||||| Sbjct 77 AGCCCGGCTAGCTCAGTCGGCAGAGCCCGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 18 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 17 CCCCACGTTGGGC 5 >seq123 Length=8196 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||||| Sbjct 7634 AGCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 7575 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 7574 CCCCACGTTGGGC 7562 >seq37 Length=1894237 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 || |||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct 762996 TGCCTCTATGGCGCAGTGGAAAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAG 763055 Query 142112 CCCCGCCAGAG 142122 ||||| |||| Sbjct 763056 TCCCGCTAGAG 763066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027523861274683