Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq63 114 1e-20 >seq63 Length=2199633 Score = 114 bits (126), Expect = 1e-20 Identities = 280/413 (68%), Gaps = 10/413 (2%) Strand=Plus/Plus Query 20173 TGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGG 20232 |||||| ||||| | ||| | || ||||| || | || |||||||| || || Sbjct 1193875 TGGCTCAATATGATTCAAGTAAACATGCGCATCGCCGAGTGTATGAATAAAATCGCCAAT 1193934 Query 20233 TCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAA 20292 | ||||| || |||||||||| ||| ||||| | | | ||| |||||||| || Sbjct 1193935 TTTAAGATTCGTGACATGAGCAATCATGTAAGTGAGTAAAGCATAAGAAGCAATGTTGAA 1193994 Query 20293 AGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTC 20352 |||||| || | ||||||||| | || | || |||| ||||| ||||||||| || Sbjct 1193995 AGGAACACCAAGACCCATGTCAGCTGAACGTTGGTACAATTGACAACTAAGCTCACCATC 1194054 Query 20353 AGCTACATAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCG 20411 ||| ||||||||||| || | ||| ||||| || || | ||||| || || || | Sbjct 1194055 AGCGACATAAAATTGCACCAAGCAA-TGACAAGGTGGCAATGCCAT-GTCGGGAA-TCTG 1194111 Query 20412 --CCGGGTTCCACGCACACATAATGATTCTTCTATC-GTGCGGATTATTTTTTATTAAAT 20468 || ||||| || ||| || || | | || ||| ||||| |||| ||| | Sbjct 1194112 AATTGGATTCCAAGCTGTCATGATAATGCGACGGTCAGTG-GGATTTCTTTTAATTCGTT 1194170 Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCA-TCCGCGTCCACG 20527 | | || | | || |||||| | || | || || || ||| || | | || | | Sbjct 1194171 CGATAACTTCCTTCAGTTGGTCGATTCCTTTACCAGTGTAATCATCATTGCATGTGC-CA 1194229 Query 20528 TACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 || | || ||||| || | |||||| || || ||||| ||||||||||| || Sbjct 1194230 TATTCAGCACCAAAATGACGCCACTGAAAGCCATAAACTGGTCCCAAATCACC 1194282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441241695726920