Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq43 95.1 3e-14 >seq43 Length=2293527 Score = 95.1 bits (104), Expect = 3e-14 Identities = 203/300 (68%), Gaps = 5/300 (2%) Strand=Plus/Minus Query 243500 AAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCC 243559 ||||||| ||||||| ||| ||| ||| | |||||| | ||| || | || || Sbjct 2197524 AAATCATTTCAGAAGCTGTTAAAATTGAACAAGAATTCCTCACCGATGCCTTGCC-TGTT 2197466 Query 243560 GGCTTATTGG-CATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618 | | |||| |||||| | ||||| ||| || ||||| || || || || || || Sbjct 2197465 AACATGTTGGGCATGAATTGCGAACTGATGTCTCAATACATTGAGTTTGTTGCTGATCGT 2197406 Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATG 243678 || || | | || || ||| | |||||| | ||||| || || ||| ||| Sbjct 2197405 CTTCTCGGTGAATTGGGAGTCGAAAAAATCTACAACACAAAGAATCCTTTCAGCTTCATG 2197346 Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 |||||||| |||||| | || ||||| ||||||||||||||| || | || |||||| Sbjct 2197345 GAGCTCATCTCGCTTGAGGGTAAAACAAACTTCTTCGAAAAGAAAGTTGGAGAGTATCAA 2197286 Query 243739 CGCCCTGGTGTGATG---AAACCAGAGGATAACATTTTTGCGATTGATGATGATTTTTAA 243795 |||| |||||| || | || || |||| | |||||| |||||||||| Sbjct 2197285 AAAGCTGGAGTGATGGCAAATCGTCTTGACAATGTTTTCACACTTGATGCTGATTTTTAA 2197226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102544213364050