Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 163 4e-35 >seq2 Length=1318413 Score = 163 bits (180), Expect = 4e-35 Identities = 876/1383 (63%), Gaps = 29/1383 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| | ||||| ||||| || || | || || ||||| |||||||||||| | | Sbjct 929865 CCACAACATATGTTAATGCGAGTTGCTGTTGGCATTCATGGCGAAGATATTGATGCAGCA 929924 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTT 111730 | || || ||| | |||| | ||| |||| || || | ||||| ||||| Sbjct 929925 ATTGAAACTTACAATTTATTGTCGGAACGATAT-TTCACGCATGCCTCTCCAACACTCTT 929983 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTG-CAAACAAGGAGG 111789 | |||| ||||| |||| ||| |||| |||||| |||||| ||| |||| Sbjct 929984 CGCAGCTGCAACACCTCGACCACAATTGTCTTCATGTTTC-TTATTGTCAATGTCCGAGG 930042 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||| || | |||||||| || ||||||| ||||| | ||| || | || | Sbjct 930043 ATTCTATTGAAGGCATTTATGGAACTCTCATGCAATGTTCATTGATCAGTAAATCAGCAG 930102 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAAC--AAGTCTCGTATTAGAGGTAC 111907 | || || || | | | ||| | ||||||| ||| | ||| || || Sbjct 930103 GAGGCATTGGATTAAATGTTCATTGCATTCGAGCCAAAGGAAGCTAC--ATTGCTGGCAC 930160 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 |||||| ||| ||||| | |||| ||||| | || | |||| |||||| || || Sbjct 930161 AAATGGGATTTCAAATGGTCTCGTTCCCATGCTGAGAGTTTATAACAACACAGCTCGTTA 930220 Query 111968 TGTAAACCAAGCTGGG------CGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 ||| |||||| ||| |||| || ||| || |||| | |||||||| || || Sbjct 930221 TGTCGACCAAGGTGGCAACAAACGTC-CA--GGAGCTTTCGCCATTTATCTTGAACCTTG 930277 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 ||| | || || | ||||||||||| ||| ||| || | || || || || Sbjct 930278 GCATGGCGACATTTTTGAGTTCCTTGATTTGAAGAAAAACACTGGAAAAGAAGAAGCTCG 930337 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 || || | |||| ||||| ||||| || ||| | || ||| | ||||| Sbjct 930338 AGCTCGTGACATGTTCTATGCTCTTTGGATCCCCGATTTGTTTATGCGTCGTGTTGAAAG 930397 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| | |||||| | | ||||| | || || | | | |||| | ||| Sbjct 930398 TAATGGAATGTGGTCTTTGATGTGTCCTCATAACAGTCCAAATTTATTCGATACTTGGGG 930457 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGAC-GG 112260 ||| || || || || || ||| || || | ||| | || | | || | || Sbjct 930458 TGAAGATTTCGAGAAACTTTATGAAAAATAAGAAGCTGAAGGACGTTACATT-CGTCAGG 930516 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 || |||| ||| | ||| || || || |||| ||| || ||||| || || | Sbjct 930517 TGAAAGCTCAAGATCTTTGGTTTGCGATCATCGAGTCACAAGTTGAAACTGGAACTCCTT 930576 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 | |||||||| |||||||| || || | || |||||| |||| | || || Sbjct 930577 ACATGCTTTATAAAGACGCTTGCAATCGCAAATCGAATCAACAGAACGTTGGCACTATTC 930636 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 | || || || || |||||||| | |||| | || ||||||||| || || | Sbjct 930637 GTTGCTCAAATCTATGCACAGAAATTGTTGAATATTCAAGCAAAGATGAAGTTGCAGTTT 930696 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG-AT 112499 ||||| | || ||||| ||| || || || ||| | | || | | | || | | || Sbjct 930697 GTAACTTAGCTTCAATTGCTGTCAACATGTTTGTCGTTGCAAATA-ATGGAAGTAAGGAT 930755 Query 112500 TATGAA------AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 ||||| ||| | | ||||| || ||||||||||||||||| || || | | | Sbjct 930756 TATGACTTCAAGAAATTAAAGGAAGTGACAAAAACTGTCACAAAAAATCTCAATAAAATC 930815 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 ||||| |||| || || ||| | || ||| |||||| | || ||||| Sbjct 930816 ATTGACGTTAATTACTATCCAGTTCCGGAAGCCAAACGATCAAATATGCGTCATCGTCCC 930875 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGAT 112673 ||||| | || || ||||| | || |||| |||||| | || | ||||| Sbjct 930876 ATTGGAATTGGAGTTCAAGGCTTAGCTGATGCTTTCATTATGATGCGAATGCCTTTTGAA 930935 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || |||||| || || | ||| || || ||||| ||||| ||| ||| || | Sbjct 930936 TCTCCCGAAGCACAGAAACTTAATCAGCAAATCTTTGAAACAATTTATTACGGAGCATTG 930995 Query 112734 GAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793 || || |||| || | || || | ||| | || || || | ||| || || ||| Sbjct 930996 GAAGCAAGTTGTGAACTTGCTGAAGAATTTGGAACTTACGAGACTTATGAAGGATCGCCA 931055 Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGA 112852 | || |||| | ||||||| ||||||| |||| | |||| || | | Sbjct 931056 GTATCTAAAGGAATTCTTCAATACGATATGT-GGAATAAAACGCCAACAGATCTTTGGAA 931114 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 ||| | || | ||||| || || | || ||||||| | ||| |||| Sbjct 931115 TTGGTCCACTTTGAAGGAGAAAATTGCTAAGCATGGCGTTCGTAATTCATTGTTGGTGGC 931174 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 ||||||||| || || || || || ||||| | || || |||||| |||| ||||| || Sbjct 931175 ACCAATGCCGACTGCTTCAACGGCTCAAATTCTCGGCAACAATGAAAGCTTCGAACCATA 931234 Query 112973 CAC 112975 ||| Sbjct 931235 CAC 931237 Score = 118 bits (130), Expect = 1e-21 Identities = 659/1044 (63%), Gaps = 27/1044 (3%) Strand=Plus/Plus Query 111950 TAACGCCACAGCGCGCTATGTAAACCAAGCTGGG------CGTCGCAAGGGATCTATCGC 112003 |||| |||||| || ||||| |||||| ||| |||| || ||| || |||| Sbjct 922086 TAACAACACAGCTCGTTATGTCGACCAAGGTGGCAACAAACGTC-CA--GGAGCTTTCGC 922142 Query 112004 AGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCA 112063 | |||||||| || ||||| | || || | ||||||||||| ||| ||| Sbjct 922143 CATTTATCTTGAACCTTGGCATGGCGACATTTTTGAGTTCCTTGATTTGAAGAAAAACAC 922202 Query 112064 AGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 112123 || | || || || || || || | |||| ||||| ||||| || ||| | || Sbjct 922203 TGGAAAAGAAGAAGCTCGAGCTCGTGACATGTTCTATGCTCTTTGGATCCCCGATTTGTT 922262 Query 112124 CATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGG 112183 ||| | ||||| | ||| | |||||| | | ||||| | || || Sbjct 922263 TATGCGTCGTGTTGAAAGTAATGGAATGTGGTCTTTGATGTGTCCTCATAACAGTCCAAA 922322 Query 112184 TCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAG 112243 | | | |||| | |||||| || || || || || ||| || || | ||| | Sbjct 922323 TTTATTCGATACTTGGGGTGAAGATTTCGAGAAACTTTATGAAAAATAAGAAGCTGAAGG 922382 Query 112244 TCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAA 112302 || | | || | |||| |||| ||| | ||| || || || |||| ||| Sbjct 922383 ACGTTACATT-CGTCAGGTGAAAGCTCAAGATCTTTGGTTTGCGATCATCGAGTCACAAG 922441 Query 112303 CCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAA 112362 || ||||| || || || |||||||| |||||||| || || | || |||||| Sbjct 922442 TTGAAACTGGAACTCCTTACATGCTTTATAAAGACGCTTGCAATCGCAAATCGAATCAAC 922501 Query 112363 AGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACA 112422 |||| | || || | || || || || |||||||| | |||| | || || Sbjct 922502 AGAACGTTGGCACTATTCGTTGCTCAAATCTATGCACAGAAATTGTTGAATATTCAAGCA 922561 Query 112423 AAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG 112482 ||||||| || || |||||| | || ||||| ||| || || || ||| | | || Sbjct 922562 AAGATGAAGTTGCAGTTTGTAACTTAGCTTCAATTGCTGTCAACATGTTTGTCGTTGCAA 922621 Query 112483 AGACAAAGACATTTG-ATTATGAA------AAACTCCACGAAGTTACGAAAACTGTCACA 112535 | | | || | | ||||||| ||| | | ||||| || |||||||||||| Sbjct 922622 ATA-ATGGAAGTAAGGATTATGACTTCAAGAAATTAAAGGAAGTGACAAAAACTGTCACA 922680 Query 112536 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAA 112592 ||||| || || | | | ||||| |||| || || || ||| | || | Sbjct 922681 AAAAATCTCAATAAAATCATTGACGTTAATTACTATCCAGTTCCTGAAGCCAAACG---A 922737 Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652 || |||||| | || ||||| ||||| | || || ||||| | || |||| |||||| Sbjct 922738 TCAAATATGCGTCATCGTCCCATTGGAATTGGAGTTCAAGGCTTAGCTGATGCTTTCATT 922797 Query 112653 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAG 112712 | || | ||||| || |||||| || || | ||| || || ||||| Sbjct 922798 ATGATGCGAATGCCTTTTGAATCTCCCGAAGCACAGAAACTTAATCAGCAAATCTTTGAA 922857 Query 112713 ACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATAT 112772 ||||| ||| ||| || | || || |||| || | || || | ||| | || Sbjct 922858 ACAATTTATTACGGAGCATTGGAAGCAAGTTGTGAACTTGCTGAAGAATTTGGAACTTAC 922917 Query 112773 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGT 112832 || || | ||| || || |||| || |||| | ||||||| ||||||| |||| Sbjct 922918 GAGACTTATGAAGGATCGCCAGTATCTAAAGGAATTCTTCAATACGATATGT-GGAATAA 922976 Query 112833 GAGACCAA-GCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCT 112891 | |||| || | | ||| | || | ||||| || || | || | Sbjct 922977 AACGCCAACAGATCTTTGGAATTGGTCCACTTTGAAGGAGAAAATTGCTAAGCATGGCGT 923036 Query 112892 TCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 112951 |||||| | ||| ||||||||||||| || || || || || ||||| | || || Sbjct 923037 TCGTAATTCATTGTTGGTGGCACCAATGCCGACTGCTTCAACGGCTCAAATTCTCGGCAA 923096 Query 112952 TAATGAATGCTTTGAACCCTACAC 112975 |||||| |||| ||||| ||||| Sbjct 923097 CAATGAAAGCTTCGAACCATACAC 923120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620558016229360