Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 >seq2 Length=1318413 Score = 100 bits (110), Expect = 3e-16 Identities = 258/389 (66%), Gaps = 12/389 (3%) Strand=Plus/Minus Query 110770 TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGAT 110829 |||| ||||| || |||||| || | || || ||||| |||| | |||| || Sbjct 930229 TGGTCGACATAACGAGCTGTGTTGTTATAAACTCTCAGCATGGGAACGAGACCATTTGAA 930170 Query 110830 TGACCATTTGTACCCCTAATTCTGGACTTA--TTGGCACGAATGTCGTGGATATGCATAC 110887 |||||||| || ||| | ||| ||||| |||||| || | || | | Sbjct 930169 ATCCCATTTGTGCCAGCAATGTAG--CTTCCTTTGGCTCGAATGCAATGAACATTTAATC 930112 Query 110888 CAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCAT 110947 |||| || || || | ||||| || || ||| | |||| || |||||||| || | Sbjct 930111 CAATGCCTCCTGCTGATTTACTGATCAATGAACATTGCATGAGAGTTCCATAAATGCCTT 930052 Query 110948 CAATCGAATCTGCCTTG----TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGC 111003 |||| ||||| || | ||| |||| ||||| || ||||||| || || ||||| Sbjct 930051 CAATAGAATC---CTCGGACATTGACAATAAGAAA-CATGAAGACAATTGTGGTCGAGGT 929996 Query 111004 GTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTG 111063 ||| | || ||||||||| || | ||||| |||| | || |||| ||| Sbjct 929995 GTTGCAGCTGCGAAGAGTGTTGGAGAGGCATGCGTGAAATATCGTTCCGACAATAAATTG 929936 Query 111064 TATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAAC 111123 || || || | ||| | | ||||| || ||||| |||| ||||||||||| ||| Sbjct 929935 TAAGTTTCAATTGCTGCATCAATATCTTCGCCATGAATGCCAACAGCAACTCGCATTAAC 929876 Query 111124 ATATATTGAGGCGTTTCGATTAGCTTTCC 111152 |||| ||| || ||||| | |||||| Sbjct 929875 ATATGTTGTGGACGTTCGACAATCTTTCC 929847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588801052041400