Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=1318413 Score = 116 bits (128), Expect = 4e-21 Identities = 872/1385 (63%), Gaps = 33/1385 (2%) Strand=Plus/Minus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| ||||| |||| |||||| || || | ||||| || || || || || |||||| Sbjct 931237 GTGTATGGTTCGAAGCTTTCATTGTTGCCGAGAATTTGAGCCGTTGAAGCAGTCGGCATT 931178 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 ||||||| ||| | ||||||| || | | || ||||| | | | Sbjct 931177 GGTGCCACCAACAATGAATTACGAACGCCATGCTTAGCAATTTTCTCCTTCAAAGTGGAC 931118 Query 106067 CAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG 106123 || | | || | | | | |||| | | ||||||||| ||||||| | |||| Sbjct 931117 CAATTCCAAAGATCTGTTGGCGTTTTA---TTCCACATATCGTATTGAAGAATTCCTTTA 931061 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183 || || || || ||| | ||||| || | || ||||||| | |||||| || Sbjct 931060 GATACTGGCGATCCTTCATAAGTCTCGTAAGTTCCAAATTCTTCAGCAAGTTCACAACTT 931001 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 || |||| | | ||| ||| || ||||||||||| | ||| | | || ||||| Sbjct 931000 GCTTCCAATGCTCCGTAATAAATTGTTTCAAAGATTTGCTGATTAAGTTTCTGTGCTTCG 930941 Query 106244 TCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAA 106302 || ||||| | | | ||| || ||| || |||| || | |||||||| || | Sbjct 930940 GGAGATTCAAAAG-GCATTCGCATCATAATGAAAGCATCAGCTAAGCCTTGAACTCCAAT 930882 Query 106303 ACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTTC 106361 ||||| || | || |||||||| || | || | || | ||| ||||| |||| Sbjct 930881 TCCAATGGGACGATGACGCATATTTGATCGTTTG-GCTTCCGGAACTGGATAGTAATTAA 930823 Query 106362 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT----- 106416 |||||||| | || |||||||| || ||| | ||||| | ||| | | ||| Sbjct 930822 CGTCAATGATTTTATTGAGATTTTTTGTGACAGTTTTTGTCACTTCCTTTAATTTCTTGA 930763 Query 106417 -TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 |||||||| | | | | | | | || |||| || | | || ||||| || | Sbjct 930762 AGTCATAATCCTTACTTCCATTATTTGCAACGACAAACATGTTGACAGCAATTGAAGCTA 930703 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || ||||| || ||||| || || || || | ||||||||| || | || | Sbjct 930702 AGTTACAAACTGCAACTTCATCTTTGCTTGAATATTCAACAATTTCTGTGCATAGATTTG 930643 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG-TTGCACGCATCCTTGTAG 106594 | | ||| || || | |||| ||| || | ||| | ||||| || || || || Sbjct 930642 AGCAACGAATAGTGCCAACGTTCTGTTGATT-CGATTTGCGATTGCAAGCGTCTTTATAA 930584 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCG 106654 |||||||| || || || || || ||||||| || || || ||| | ||| Sbjct 930583 AGCATGTAAGGAGTTCCAGTTTCAACTTGTGACTCGATGATCGCAAACCAAAGATCTTGA 930524 Query 106655 GCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 ||| || || || || ||||| || || || || ||| || || || || Sbjct 930523 GCTTTCAC-CTGACGAATGTAACGTCCTTCAGCTTCTTATTTTTCATAAAGTTTCTCGAA 930465 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 106773 || |||||| | ||| | | | ||| || | ||||| | | |||||| Sbjct 930464 ATCTTCACCCCAAGTATCGAATAAATTTGGACTGTTATGAGGACACATCAAAGACCACAT 930405 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 ||| ||||| || ||| || | || || ||||| || | | || | || Sbjct 930404 TCCATTACTTTCAACACGACGCATAAACAAATCGGGGATCCAAAGAGCATAGAACATGTC 930345 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATAT 106892 | | ||||| ||||| | || ||| || | || ||||||||||| | || | Sbjct 930344 ACGAGCTCGAGCTTCTTCTTTTCCAGTGTT-TTTCTTCAAATCAAGGAACTCAAAAATGT 930286 Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 106948 | | ||||| || |||||||| | |||| || ||| | || | | ||| |||| Sbjct 930285 CGCCATGCCAAGGTTCAAGATAAATGGCGAAAGCTCCTGGACGTTTGTTG-CCACCTTGG 930227 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | ||||| || |||||| |||| | || | ||||| |||| | ||||| ||| Sbjct 930226 TCGACATAACGAGCTGTGTTGTTATAAACTCTCAGCATGGGAACGAGACCATTTGAAATC 930167 Query 107009 CCATTTGTCCCCCGAATACGAGATT-TATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067 |||||||| || ||| || || ||||||| | ||| | | | ||||| Sbjct 930166 CCATTTGTGCCAGCAAT-GTAGCTTCCTTTGGCTCGAATGCAATGAACATTTAATCCAAT 930108 Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127 || || || | || ||| | ||| | | | ||||||||||| || || | || Sbjct 930107 GCCTCCTGCTGATTTACTGATCAATGAACATTGCATGAGAGTTCCATAAATGCCTTCAAT 930048 Query 107128 TGAGTCCTC-CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 || ||||| ||| | |||| ||| || |||| || |||| ||||| ||| Sbjct 930047 AGAATCCTCGGACATTGACAATAA-GAAACATGAAGACAATTGTGGTCGAGGTGTTGCAG 929989 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACATCTTGTCGTATGTC 107245 | |||||| ||||| | || || |||| ||| | || |||| | ||| || Sbjct 929988 CTGCGAAGAGTGTTGGAGAGGCATGCGTGAA-ATATCGTTCCGACAATAAATTGTAAGTT 929930 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTAT 107305 || | | | |||||| ||||| || || ||||| | || || ||||| ||||| | | Sbjct 929929 TCAATTGCTGCATCAATATCTTCGCCATGAATGCCAACAGCAACTCGCATTAACATATGT 929870 Query 107306 TGGGG 107310 || || Sbjct 929869 TGTGG 929865 Score = 100 bits (110), Expect = 3e-16 Identities = 448/699 (64%), Gaps = 22/699 (3%) Strand=Plus/Minus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| ||||| |||| |||||| || || | ||||| || || || || || |||||| Sbjct 923120 GTGTATGGTTCGAAGCTTTCATTGTTGCCGAGAATTTGAGCCGTTGAAGCAGTCGGCATT 923061 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 ||||||| ||| | ||||||| || | | || ||||| | | | Sbjct 923060 GGTGCCACCAACAATGAATTACGAACGCCATGCTTAGCAATTTTCTCCTTCAAAGTGGAC 923001 Query 106067 CAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG 106123 || | | || | | | | |||| | | ||||||||| ||||||| | |||| Sbjct 923000 CAATTCCAAAGATCTGTTGGCGTTTTA---TTCCACATATCGTATTGAAGAATTCCTTTA 922944 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183 || || || || ||| | ||||| || | || ||||||| | |||||| || Sbjct 922943 GATACTGGCGATCCTTCATAAGTCTCGTAAGTTCCAAATTCTTCAGCAAGTTCACAACTT 922884 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 || |||| | | ||| ||| || ||||||||||| | ||| | | || ||||| Sbjct 922883 GCTTCCAATGCTCCGTAATAAATTGTTTCAAAGATTTGCTGATTAAGTTTCTGTGCTTCG 922824 Query 106244 TCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAA 106302 || ||||| | | | ||| || ||| || |||| || | |||||||| || | Sbjct 922823 GGAGATTCAAAAG-GCATTCGCATCATAATGAAAGCATCAGCTAAGCCTTGAACTCCAAT 922765 Query 106303 ACCAATAGGTCTGTGTCGCATATTAGA--CTTTCGC-GCAGTCTCAACGGGATAAAAATT 106359 ||||| || | || |||||||| || ||| || ||| ||| ||||| |||| Sbjct 922764 TCCAATGGGACGATGACGCATATTTGATCGTTTGGCTTCAG---GAACTGGATAGTAATT 922708 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT--- 106416 |||||||| | || |||||||| || ||| | ||||| | ||| | | ||| Sbjct 922707 AACGTCAATGATTTTATTGAGATTTTTTGTGACAGTTTTTGTCACTTCCTTTAATTTCTT 922648 Query 106417 ---TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGC 106473 |||||||| | | | | | | | || |||| || | | || ||||| || Sbjct 922647 GAAGTCATAATCCTTACTTCCATTATTTGCAACGACAAACATGTTGACAGCAATTGAAGC 922588 Query 106474 CAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTT 106533 || || ||||| || ||||| || || || || | ||||||||| || | || Sbjct 922587 TAAGTTACAAACTGCAACTTCATCTTTGCTTGAATATTCAACAATTTCTGTGCATAGATT 922528 Query 106534 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG-TTGCACGCATCCTTGT 106592 || | ||| || || | |||| ||| || | ||| | ||||| || || || | Sbjct 922527 TGAGCAACGAATAGTGCCAACGTTCTGTTGATT-CGATTTGCGATTGCAAGCGTCTTTAT 922469 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631 | |||||||| || || || || || ||||||| || Sbjct 922468 AAAGCATGTAAGGAGTTCCAGTTTCAACTTGTGACTCGA 922430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589805553578120