Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq55 109 6e-19 >seq55 Length=2529122 Score = 109 bits (120), Expect = 6e-19 Identities = 204/296 (69%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||||||||| || | |||||| |||| |||| | || ||||| || || ||| Sbjct 1478776 GATATTGCTGTTGGAACATCGCAAAGACTTGGAGTTCCACTTGGTTATGGTGGCCCCCAT 1478835 Query 153807 GCTGCATTCTTTGC--AACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG 153864 || | |||||||| |||||| || || || ||| || || |||| || | Sbjct 1478836 GCCGGCTTCTTTGCTTGTAAACAGA-AATTA-GTTCGATTGATTCCGGGACGAATGGTTG 1478893 Query 153865 GTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 153924 | | || ||| ||| ||| || | || || | ||||| |||| || | || | Sbjct 1478894 GCGTGACACGTGATCATGATGGTCATGACGCTTATCGTTTAGCTTTACAAACACGCGAAC 1478953 Query 153925 AGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTA 153984 | |||||||| ||||| |||||||| ||||| || |||||||| || || |||| || | Sbjct 1478954 AACATATCAGAAGAGATAAAGCAACAAGTAATATTTGCACAGCACAAGCTTTGCTTGCGA 1479013 Query 153985 ATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCA 154040 | ||||| | | | ||||| |||||||| |||||||| || | | ||| ||| Sbjct 1479014 ACATGTCAGCGATGTTTGCAGTTTATCATGGGCCAGATGGATTAAAAGATATTGCA 1479069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579040752077920