Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq55 114 2e-20 >seq55 Length=2529122 Score = 114 bits (126), Expect = 2e-20 Identities = 204/296 (69%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 || |||||||| || | |||||| |||| |||| | || || || || || ||| Sbjct 1478776 GATATTGCTGTTGGAACATCGCAAAGACTTGGAGTTCCACTTGGTTATGGTGGCCCCCAT 1478835 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGA--GAAAGATACCTGGCAGAATTGTAG 158539 || | |||||||| | | | || || || || ||| || || |||| || | Sbjct 1478836 GCCGGCTTCTTTGCTTGTAAACAGAA--ATTAGTTCGATTGATTCCGGGACGAATGGTTG 1478893 Query 158540 GTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 158599 | | || ||| || ||| || | || || | ||||| |||| || | || | Sbjct 1478894 GCGTGACACGTGATCATGATGGTCATGACGCTTATCGTTTAGCTTTACAAACACGCGAAC 1478953 Query 158600 AGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTA 158659 | |||||||||||||| |||||||| ||||| || |||||||||||||| |||| || | Sbjct 1478954 AACATATCAGAAGAGATAAAGCAACAAGTAATATTTGCACAGCACAAGCTTTGCTTGCGA 1479013 Query 158660 ATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCA 158715 | ||||| | | | | ||||| |||||||| |||||||| || | | ||| ||| Sbjct 1479014 ACATGTCAGCGATGTTTGCAGTTTATCATGGGCCAGATGGATTAAAAGATATTGCA 1479069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587876526741680