Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq55 84.2 1e-11 >seq55 Length=2529122 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| |||| ||| ||||||||||||||||| ||| | || | || || | Sbjct 2062108 CAAGATGAAGTGTGGATTCCTTCTGAATGTTATAGTCACTAAGAGTACGACCGTCTTCTA 2062049 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 || ||||| ||||| || | |||||||| ||| | || | || |||||||| | Sbjct 2062048 ATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTGTCTTGGA 2061989 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 |||| ||||| | | || | || | ||| || |||| || || || || | Sbjct 2061988 TCTTAGCCTTGACATTTTCAATTGTATCTGATGGCTCGACTTCGAGAGTGATAGTCTTGC 2061929 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | |||||||| ||||| ||||| ||||| || Sbjct 2061928 CAGTGAGAGTTTTCACGAAGATTTGCATTTT 2061898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324539582355864