Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq64 549 2e-151 seq2 482 3e-131 seq43 300 2e-76 seq63 84.2 2e-11 >seq64 Length=2694604 Score = 549 bits (608), Expect = 2e-151 Identities = 1250/1883 (66%), Gaps = 36/1883 (2%) Strand=Plus/Minus Query 46964 TAATTTGTCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATA 47023 |||||| | || || |||||||| | ||||| ||| |||| ||||||||| | || Sbjct 2452016 TAATTTTTGCTTGTCAACAGTAAATTGAATTGCATTTGCTGCTGGTTTTGTTCGAAGGTA 2451957 Query 47024 ATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGA 47083 |||||| |||||||| | ||| | |||| |||||||||| ||| || | ||| Sbjct 2451956 ATACATTCCAGTCTTAAGTCCTTTATTCCAAGCATAGAAATGAATAGACGTGAGTTTGCC 2451897 Query 47084 ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCT 47143 |||| |||| || | | |||||||||| || || ||||||||||||||| || | Sbjct 2451896 ATAATTAGGCTCAGCCACGTGAATATTAAACGACTGCGACTGATCAATAAATGCGCCACG 2451837 Query 47144 ATCAGCTGCCATATCTAAAATAACCCTTTG--TGGTATCTCCCATACTGTTTTATAAATT 47201 |||||||||||| | || | | ||| || ||| ||||| || || |||||||| Sbjct 2451836 ATCAGCTGCCATTTG--AATTTGCTTCTTGATTGATATTTCCCAAACAGTCTTATAAATC 2451779 Query 47202 TGTTTAATGTCTTCTGGGAGATTAGT--ATTT--TGAATAGATCCTCCgttttctataat 47257 | || | ||| |||| || | |||| |||| ||||| || | | ||||| Sbjct 2451778 TCACGAACTTTTTC-GGGAATTTCTTCGATTTGTTGAACTGATCCGTTGTGTGCAATAAT 2451720 Query 47258 tttgttttttaattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGG 47317 ||| || || | | || ||| | || ||| ||||| ||| | ||||||| | Sbjct 2451719 TTTATTCTTCATGTTATCATTCCACAAGTTAAGTTTGGTTAAATCTTTAATAAGATGATG 2451660 Query 47318 ATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGG 47377 || |||| ||||||||||||| || |||| ||| | || | |||||||| ||||| Sbjct 2451659 GTTGACAACTTGAAATTCTCCACTTAAAACTCGACGATTGTAGACGTTACTTGTGTATGG 2451600 Query 47378 TTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAAC 47437 ||| | |||||| || || |||||||| || ||||| || || ||||| | ||| | Sbjct 2451599 TTCGAAGCTTTCATTGTTACCTAAAATTTGGGCTGTTGAAGCAGTTGGCATTGGTGCGAT 2451540 Query 47438 TAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCA 47497 ||| || |||||| || |||| |||| || | | ||||||||| Sbjct 2451539 TAACAAAGAATTTCTCACGCCATGTTTTGCGATTTTACTCTTTAAAGTTGACCAATCCCA 2451480 Query 47498 AAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGA 47557 |||||| | ||| ||||||| | || |||| ||||||||||| | ||||| Sbjct 2451479 AAGATCGGTTGGCGTTTCATTCCACATGTCGAATTGCAGAATTCCTTTCGACACTGGAGA 2451420 Query 47558 ACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGC 47617 ||| | || || | ||||| || | || || ||||||||||||||||| ||||| Sbjct 2451419 ACCTTGGTAAGTCTCATAAGTTCCAAGTTCTTCAGAAAGTTCACAACTTGCTTCTAATGC 2451360 Query 47618 ACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAA 47677 | |||| ||||| || || || | | | || || || |||||||| | ||||||||| Sbjct 2451359 GCCGAAATAAATTGTCTCGAAAATCTGTTTATTAAGTTTACTTGCTTCGGCTGATTCAAA 2451300 Query 47678 AGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCT 47737 ||| |||| ||| || || |||||||| ||||| |||||||||| Sbjct 2451299 AGGCATTCTCATCATGATAAATGCATCGGCTAAACCTTGAACTCCAATTCCAATTGGTCG 2451240 Query 47738 ATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTT 47797 |||| | || || | ||||||||||| |||||| ||| | ||| || ||||| Sbjct 2451239 ATGACGCATGTTGGATTTTTTAGCTTCTGGTATTGGATAAAAGTTCACATCGATGATTTT 2451180 Query 47798 ATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAAC----- 47852 ||| ||| ||| ||| | || || | ||||||| || Sbjct 2451179 ATTCAGATTTCTTGCTACAATCTTGGCAACTTCCTTCAACTTTTCAAAATCATACGAAAT 2451120 Query 47853 ----------TTGTTATTTATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATAC 47902 || || | | ||||||| | || || ||||| || || | |||||| || Sbjct 2451119 TTCTCCTTCATTTTTCGTCACAACAAACATGTTTAGAGCTATCGAAGCCAAATTACAAAC 2451060 Query 47903 AGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGAT 47962 |||||| |||||| ||| | ||||| | || || | || ||||| ||| | || Sbjct 2451059 AGCTACTTCATTTTTATTGGAATATTCAAGAATCTCTGTGCAAAGATTTGAACAATGAAT 2451000 Query 47963 AGTACCCAAATTTTGATGATTATTNNNNTTG-TTACATGCGTCCTTGTAAAGCATAAAAG 48021 || || | ||| || || || | | | || ||||| || ||||||||||| ||| Sbjct 2450999 CGTTCCAAGATTCTGTTGGTT-TGATTTTCGATTGCATGCATCTTTGTAAAGCATGTAAG 2450941 Query 48022 GTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTA--- 48078 | ||||| ||||| | ||||| ||||| || | ||||| | || | ||||| Sbjct 2450940 GCGTTCCCGTTTCCACTTGAGACTCAATAATGGCAAACCAAAGA-TCTTGTGCTTTAATT 2450882 Query 48079 TAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCC 48138 | || | || | || || ||| ||||| || | || |||||||| || | Sbjct 2450881 TGACGAATATATCGGCCTT--CACTTTCATATTTCTCGTAAAGTTTATCAAATTCTTCTC 2450824 Query 48139 CATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCA-ATCCTCATCA 48197 | | || | | || || |||| | | ||||||||||| ||||| || | ||| | Sbjct 2450823 CCCAAACTTCAAACAATCCTGGACTGTTGTAGGGACACATCAAAGACCACATTC-CATTA 2450765 Query 48198 TTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTT 48257 | | || | | |||||| | |||||| ||||||||| | ||| | |||||| | | Sbjct 2450764 CTCTCAACACGACGCATAAACAAATCTGGAATCCAAAGACCATAAAACATATCCCTGGCT 2450705 Query 48258 CTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGC 48317 |||| || ||| | || |||| | ||||| | ||||| || | || || ||||| Sbjct 2450704 CTTACTTTTTCCTCTCCCGTATTTTTCTTAAGATTCAGAAACTCGAAGATGTCGCCATGC 2450645 Query 48318 CATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATAT 48377 |||||||| | ||| || || | | || || ||||||||||| | || || | ||| Sbjct 2450644 CATGGTTCAAGATAAATGGCGAAAGCTCCAGGACGTTTATTACCACTCTGGTCAACATAA 2450585 Query 48378 CTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTT 48437 | || || ||||| | |||| ||||| ||||||| |||||| | || ||||| || Sbjct 2450584 CAAGCGGTGTTGTTGAATACTCGCAACATAGGGACAAGACCATTAGCAATGCCATTTGTG 2450525 Query 48438 CCCGAAATATAACTTCCACTAGCTCTTATATTACTAA-TTGAAATACCTATACCACCTGC 48496 || | ||| |||||||| ||||||| || | || | ||| || || ||||| || Sbjct 2450524 CCTGCAATGTAACTTCCCCTAGCTCGAATGCAATGAACGTTCAAT-CCAATTCCACCAGC 2450466 Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556 ||| || |||||||| | | || || | ||| ||||| ||| ||| || Sbjct 2450465 AGATTTGCTGATGAGAGCACATTGGGTGAGTGTGTGGAAAACACCTTCGATAGAATCCTC 2450406 Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616 ||| | |||||||||| || | ||| || | ||| | | | ||| | Sbjct 2450405 CGACATTGAGAGTAGAAAACAAGACGATAATTGAGGTCTTCTTGTTGCAGCAGCAAAAAG 2450346 Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676 |||||| ||||||||| | || || | |||||| || || || |||||||| | | Sbjct 2450345 TGTTGGCGATGCATGAGTGAAGTATCGTTGTGATAATAAATTGTAAGTTTCAATTGCTGC 2450286 Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 || || || ||| || || |||| ||| ||||| ||||| | ||||||||| || Sbjct 2450285 ATTAATGTCTGCACCATGAATTCCGATAGCTACTCGCATCAACATGTGTTGAGGTCTCTC 2450226 Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 |||||||| || |||||||| | ||| | |||||||||||| || || ||||| Sbjct 2450225 GACAATTTTCCCTTTAATTTTCAACAAATAACTTCGTTCCAATGTTTTGAATCCGAAATA 2450166 Query 48797 GTTGTATGAAAAGTCGTTATCAT 48819 ||||| | ||| || | ||||| Sbjct 2450165 ATTGTAAGCAAAATCATGATCAT 2450143 >seq2 Length=1318413 Score = 482 bits (534), Expect = 3e-131 Identities = 1416/2172 (65%), Gaps = 74/2172 (3%) Strand=Plus/Minus Query 46974 TTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCA 47033 || || ||||| || | ||||| |||| |||| ||||| ||||| |||||||| ||| Sbjct 931636 TTATCTACAGTGAATTGAATTGCATTAGCAGCTGGCTTTGTACGTAAGTAATACATTCCA 931577 Query 47034 GTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGT 47093 || || || || | ||||| ||| ||| || || ||| || || |||| | ||| Sbjct 931576 GTTTTCAATCCCATTTTCCATGCATGGAAGTGAATTGAAGTCAACTTTCCATAATTTGGT 931517 Query 47094 TCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCC 47153 || | || |||||||||| ||||| ||||| || |||||||| | |||||||||| Sbjct 931516 TCAGCAACGTGAATATTAAATGATTGTGATTGATCGATGAATGCACCACGATCAGCTGCC 931457 Query 47154 ATATCTAAAATAACCCTTTG-TGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 || | || | | |||| || || ||||| || || || ||||| | ||| || Sbjct 931456 ATTTG-AATTTGATTCTTTACTGACATTTCCCAAACGGTCTTGTAAATCTCACGAATATC 931398 Query 47213 TTCTGGGAGAT-TAGTATT--TTGAATAGATCCTCCgttttctataattttgttttttaa 47269 || ||| | | | ||| |||||| ||||| ||| | || ||||| ||||| | Sbjct 931397 TTGTGGAATTTCTTCAATTGATTGAATTGATCCGTTGTTGCCGATGATTTTATTTTTCAT 931338 Query 47270 ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329 |||| ||| | | |||||||| || || | |||||| ||||||||| ||| Sbjct 931337 GTCATCATCCCACAAATCACGTTCAGTCAAATCCTTGATGAGATGATGATTAACAACTTG 931278 Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389 ||| |||||| || || | ||| | || | || ||||| |||||||| | ||| Sbjct 931277 AAACTCTCCACTAAGAACACGTCGGTTGTAAACGTTGCTTGTGTATGGTTCGAAGCTTTC 931218 Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449 ||| || || | ||||||||| ||||| || || ||||| | ||| || || || ||| Sbjct 931217 ATTGTTGCCGAGAATTTGAGCCGTTGAAGCAGTCGGCATTGGTGCCACCAACAATGAATT 931158 Query 47450 TCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGG 47509 | || |||| || || | ||||| ||||||||||| ||| Sbjct 931157 ACGAACGCCATGCTTAGCAATTTTCTCCTTCAAAGTGGACCAATTCCAAAGATCTGTTGG 931098 Query 47510 AACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGT 47569 |||||| | ||| |||||||||||||||||| || || || || | ||| || Sbjct 931097 CGTTTTATTCCACATATCGTATTGAAGAATTCCTTTAGATACTGGCGATCCTTCATAAGT 931038 Query 47570 TTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATAT 47629 | |||| || || || ||| ||||||||||||||||||||||| | ||||| || Sbjct 931037 CTCGTAAGTTCCAAATTCTTCAGCAAGTTCACAACTTGCTTCCAATGCTCCGTAATAAAT 930978 Query 47630 TGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNNNNN 47689 ||||||||| |||| || || ||| |||||| | ||||||||||| Sbjct 930977 TGTTTCAAAGATTTGCTGATTAAGTTTCTGTGCTTCGGGAGATTCAAAAGGCATTCGCAT 930918 Query 47690 NNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATT 47749 || | ||| || || |||||||| ||||| ||||| || | |||| |||| Sbjct 930917 CATAATGAAAGCATCAGCTAAGCCTTGAACTCCAATTCCAATGGGACGATGACGCATATT 930858 Query 47750 AGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNNN 47809 || | ||||| || | |||||| | || | || || |||||||| ||| Sbjct 930857 TGATCGTTTGGCTTCCGGAACTGGATAGTAATTAACGTCAATGATTTTATTGAGATTTTT 930798 Query 47810 NNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAA-------CTTG--TTATT 47860 | ||| ||||||| || || ||| | ||| ||||| Sbjct 930797 TGTGACAGTTTTTGTCACTTCCTTTAATTTCTTGAAGTCATAATCCTTACTTCCATTATT 930738 Query 47861 TATAAC---AAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT-TTG 47916 | ||| |||| | || | || || || |||| ||||| || || || |||| || Sbjct 930737 TGCAACGACAAACATGTTGACAGCAATTGAAGCTAAGTTACAAACTGCAACTTCATCTTT 930678 Query 47917 GATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTT 47976 | || | ||||| | ||||| | |||||||| || ||||| || | || | Sbjct 930677 GCTT-GAATATTCAACAATTTCTGTGCATAGATTTGAGCAACGAATAGTGCCAACGTTCT 930619 Query 47977 GATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTC 48034 | ||||| ||| | | || ||||| || |||||||| |||| ||||||||||| Sbjct 930618 GTTGATTCGATTTGCGAT--TGCAAGCGTCTTTATAAAGCATGTAAGGAGTTCCAGTTTC 930561 Query 48035 TATCTGAGATTCAATGATAGATTTCCAAACAGTCCT-AGCCTTTA--TAACAGCTCTAGC 48091 | || || || ||||| | ||||| | || | ||| || | | || | || | Sbjct 930560 AACTTGTGACTCGATGATCGCAAACCAAAGA-TCTTGAGCTTTCACCTGACGAATGTAAC 930502 Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATC 48151 | || || ||| ||||| ||| | ||||| || || || || | | |||| Sbjct 930501 GTCCTT--CAGCTTCTTATTTTTCATAAAGTTTCTCGAAATCTTCACCCCA---AGTATC 930447 Query 48152 TAACCCA---GGACATTCATTAGGACACATCAATGACCA-ATCCTCATCATTTTTTACTC 48207 || | |||| | || |||||||||||| ||||| || | ||| | ||| || | Sbjct 930446 GAATAAATTTGGACTGTTATGAGGACACATCAAAGACCACATTC-CATTACTTTCAACAC 930388 Query 48208 TAGTCATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCT 48266 | |||||| | ||| || ||||||||||| ||| || | || | || || |||| Sbjct 930387 GACGCATAAACAAATCGGGGATCCAAAGAGC-ATAGAACATGTCACGAGCTCGAGCTTCT 930329 Query 48267 TCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCT 48326 || || ||| | || | || | ||||| || || | || || ||||||| ||||| Sbjct 930328 TCTTTTCCAGTGTTTTTCTTCAAATCAAGGAACTCAAAAATGTCGCCATGCCAAGGTTCA 930269 Query 48327 AAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTA 48386 | ||| || || | | ||||| ||||| || || ||||| || | ||| | || || Sbjct 930268 AGATAAATGGCGAAAGCTCCTGGACGTTTGTTGCCACCTTGGTCGACATAACGAGCTGTG 930209 Query 48387 TTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATA 48446 |||||||||||||| | ||| || || | ||||||||| || ||||| || || | ||| Sbjct 930208 TTGTTATAAACTCTCAGCATGGGAACGAGACCATTTGAAATCCCATTTGTGCCAGCAATG 930149 Query 48447 TAACTTCCACTAGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTA 48503 || ||||| | |||| || || | | || ||| || || || ||||| |||| Sbjct 930148 TAGCTTCCTTTGGCTCGAATGCAATGAACATTT--AAT-CCAATGCCTCCTGCTGATTTA 930092 Query 48504 GATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATA 48563 || | | ||| | | || || ||||||| ||||| ||| ||| || ||| Sbjct 930091 CTGATCAATGAACATTGCATGAGAGTTCCATAAATGCCTTCAATAGAATCCTCGGACATT 930032 Query 48564 TTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGA 48623 |||| ||||| ||||| ||| || || ||| | | || | ||||||| Sbjct 930031 GACAATAAGAAACATGAAGACAATTGTGGTCGAGGTGTTGCAGCTGCGAAGAGTGTTGGA 929972 Query 48624 GATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATA 48683 || ||||| | || || || || || || || || |||||||| | | ||| ||| Sbjct 929971 GAGGCATGCGTGAAATATCGTTCCGACAATAAATTGTAAGTTTCAATTGCTGCATCAATA 929912 Query 48684 TCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATT 48743 || ||| || || | || || ||||||||||||| ||| || | ||| ||||| Sbjct 929911 TCTTCGCCATGAATGCCAACAGCAACTCGCATTAACATATGTTGTGGACGTTCGACAATC 929852 Query 48744 TTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803 || || ||| |||| | || | ||||| ||||| || |||||||||||||| Sbjct 929851 TTTCCTTTGATTCTCAACAAGTAGCTTCGCTCCAAGGTTTTGAATCCAAAATAGTTGTAA 929792 Query 48804 GAAAAGTCGTTATCATTAATAATTGATGAATTT-----------ATTCTTTCCTTATGTT 48852 |||||| ||||| ||||||| |||||| |||| ||| ||||| | Sbjct 929791 CCAAAGTCACGATCATAGATAATTGCCGAATTTAAGCGATCAGCATTC-TTCATTATGAT 929733 Query 48853 TATATACT--ACATCCATTA-CAT----------TTTTTGATATAATTGATTCC----TT 48895 || | | ||| ||| ||| || || | ||| | | || | || Sbjct 929732 GTCATGATGGAAATCACTTATCATTGGTGTTTTCTTCTTCAAATATTCGTTTTCCATGTT 929673 Query 48896 GTAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATAT 48955 | | || || || | ||||||||| ||| |||||| |||||||| || | ||| |||| Sbjct 929672 GAAGAGGTCATCCATAACATCACTGAATTGTTTTTTAGTTTCTTTGTGTAAATTCGATAC 929613 Query 48956 AGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACTAGATAT 49015 || || | ||| || | | || ||||||| ||| ||||| ||| || | Sbjct 929612 AGCAATACGAGCTGCAAGAACGGCGTAATCTGCATGGTCAGTTGTCATTGTTGCAGCCGT 929553 Query 49016 TTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAAC 49075 || |||||||| |||| | ||| || ||||| || ||||| | || | |||||| Sbjct 929552 CTCAGCTGCTAAATTATCAAGTTCAACTGTTGTTACGCCAGTATAGAGACCATTAATAAC 929493 Query 49076 TTTCATTGCTAT 49087 ||||| || ||| Sbjct 929492 TTTCAATGTTAT 929481 Score = 349 bits (386), Expect = 4e-91 Identities = 953/1453 (66%), Gaps = 39/1453 (3%) Strand=Plus/Minus Query 46974 TTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCA 47033 || || ||||| || | ||||| |||| |||| ||||| ||||| |||||||| ||| Sbjct 923519 TTATCTACAGTGAATTGAATTGCATTAGCAGCTGGCTTTGTACGTAAGTAATACATTCCA 923460 Query 47034 GTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGT 47093 || || || || | ||||| ||| ||| || || ||| || || |||| | ||| Sbjct 923459 GTTTTCAATCCCATTTTCCATGCATGGAAGTGAATTGAAGTCAACTTTCCATAATTTGGT 923400 Query 47094 TCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCC 47153 || | || |||||||||| ||||| ||||| || |||||||| | |||||||||| Sbjct 923399 TCAGCAACGTGAATATTAAATGATTGTGATTGATCGATGAATGCACCACGATCAGCTGCC 923340 Query 47154 ATATCTAAAATAACCCTTT-GTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 || | || | | |||| || || ||||| || || || ||||| | ||| || Sbjct 923339 AT-TTGAATTTGATTCTTTACTGACATTTCCCAAACGGTCTTGTAAATCTCACGAATATC 923281 Query 47213 TTCTGGGAGAT-TAGTATT--TTGAATAGATCCTCCgttttctataattttgttttttaa 47269 || ||| | | | ||| |||||| ||||| ||| | || ||||| ||||| | Sbjct 923280 TTGTGGAATTTCTTCAATTGATTGAATTGATCCGTTGTTGCCGATGATTTTATTTTTCAT 923221 Query 47270 ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329 |||| ||| | | |||||||| || || | |||||| ||||||||| ||| Sbjct 923220 GTCATCATCCCACAAATCACGTTCAGTCAAATCCTTGATGAGATGATGATTAACAACTTG 923161 Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389 ||| |||||| || || | ||| | || | || ||||| |||||||| | ||| Sbjct 923160 AAACTCTCCACTAAGAACACGTCGGTTGTAAACGTTGCTTGTGTATGGTTCGAAGCTTTC 923101 Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449 ||| || || | ||||||||| ||||| || || ||||| | ||| || || || ||| Sbjct 923100 ATTGTTGCCGAGAATTTGAGCCGTTGAAGCAGTCGGCATTGGTGCCACCAACAATGAATT 923041 Query 47450 TCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGG 47509 | || |||| || || | ||||| ||||||||||| ||| Sbjct 923040 ACGAACGCCATGCTTAGCAATTTTCTCCTTCAAAGTGGACCAATTCCAAAGATCTGTTGG 922981 Query 47510 AACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGT 47569 |||||| | ||| |||||||||||||||||| || || || || | ||| || Sbjct 922980 CGTTTTATTCCACATATCGTATTGAAGAATTCCTTTAGATACTGGCGATCCTTCATAAGT 922921 Query 47570 TTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATAT 47629 | |||| || || || ||| ||||||||||||||||||||||| | ||||| || Sbjct 922920 CTCGTAAGTTCCAAATTCTTCAGCAAGTTCACAACTTGCTTCCAATGCTCCGTAATAAAT 922861 Query 47630 TGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNNNNN 47689 ||||||||| |||| || || ||| |||||| | ||||||||||| Sbjct 922860 TGTTTCAAAGATTTGCTGATTAAGTTTCTGTGCTTCGGGAGATTCAAAAGGCATTCGCAT 922801 Query 47690 NNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATT 47749 || | ||| || || |||||||| ||||| ||||| || | |||| |||| Sbjct 922800 CATAATGAAAGCATCAGCTAAGCCTTGAACTCCAATTCCAATGGGACGATGACGCATATT 922741 Query 47750 AGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNNN 47809 || | ||||| || | |||||| | || | || || |||||||| ||| Sbjct 922740 TGATCGTTTGGCTTCAGGAACTGGATAGTAATTAACGTCAATGATTTTATTGAGATTTTT 922681 Query 47810 NNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAA---CTT------GTTATT 47860 | ||| ||||||| || || ||| | ||| ||||| Sbjct 922680 TGTGACAGTTTTTGTCACTTCCTTTAATTTCTTGAAGTCATAATCCTTACTTCCATTATT 922621 Query 47861 T---ATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT-TTG 47916 | | |||||| | || | || || || |||| ||||| || || || |||| || Sbjct 922620 TGCAACGACAAACATGTTGACAGCAATTGAAGCTAAGTTACAAACTGCAACTTCATCTTT 922561 Query 47917 GATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTT 47976 | || | ||||| | ||||| | |||||||| || ||||| || | || | Sbjct 922560 GCTT-GAATATTCAACAATTTCTGTGCATAGATTTGAGCAACGAATAGTGCCAACGTTCT 922502 Query 47977 GATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTC 48034 | ||||| ||| || || ||||| || |||||||| |||| ||||||||||| Sbjct 922501 GTTGATTCGATTTGCG--ATTGCAAGCGTCTTTATAAAGCATGTAAGGAGTTCCAGTTTC 922444 Query 48035 TATCTGAGATTCAATGATAGATTTCCAAACAGTCCT-AGCCTTTA--TAACAGCTCTAGC 48091 | || || || ||||| | ||||| | || | ||| || | | || | || | Sbjct 922443 AACTTGTGACTCGATGATCGCAAACCAAAGA-TCTTGAGCTTTCACCTGACGAATGTAAC 922385 Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATC 48151 | | ||| ||| ||||| ||| | ||||| || || || || | | |||| Sbjct 922384 GTCCT--TCAGCTTCTTATTTTTCATAAAGTTTCTCGAAATCTTCACC---CCAAGTATC 922330 Query 48152 ---TAACCCAGGACATTCATTAGGACACATCAATGACCA-ATCCTCATCATTTTTTACTC 48207 ||| |||| | || |||||||||||| ||||| || | ||| | ||| || | Sbjct 922329 GAATAAATTTGGACTGTTATGAGGACACATCAAAGACCACATTC-CATTACTTTCAACAC 922271 Query 48208 TAGTCATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCT 48266 | |||||| | ||| || ||||||||||| ||| || | || | || || |||| Sbjct 922270 GACGCATAAACAAATCGGGGATCCAAAGAGC-ATAGAACATGTCACGAGCTCGAGCTTCT 922212 Query 48267 TCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCT 48326 || || ||| | || | || | ||||| || || | || || ||||||| ||||| Sbjct 922211 TCTTTTCCAGTGTTTTTCTTCAAATCAAGGAACTCAAAAATGTCGCCATGCCAAGGTTCA 922152 Query 48327 AAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTA 48386 | ||| || || | | ||||| ||||| || || ||||| || | ||| | || || Sbjct 922151 AGATAAATGGCGAAAGCTCCTGGACGTTTGTTGCCACCTTGGTCGACATAACGAGCTGTG 922092 Query 48387 TTGTTATAAACTC 48399 ||||||||||||| Sbjct 922091 TTGTTATAAACTC 922079 >seq43 Length=2293527 Score = 300 bits (332), Expect = 2e-76 Identities = 473/673 (70%), Gaps = 12/673 (2%) Strand=Plus/Plus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| ||||| ||||||||| || ||||| | ||||| ||||| || ||||| ||||| Sbjct 2197271 CATCACTCCAGCTTTTTGATACTCTCCAACTTTCTTTTCGAAGAAGTTTGTTTTACCCTC 2197330 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776 | || || ||||| || || ||||| ||| || || ||||||| || ||| Sbjct 2197331 AAGCGAGATGAGCTCCATGAAGCTGAAAGGATTCTTTGTGTTGTAGATTTTTTCGACTCC 2197390 Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836 ||||| || || | ||| || ||||| | ||| ||| ||||| || ||||| Sbjct 2197391 CAATTCACCGAGAAGACGATCAGCAACAAACTCAATGTATTGAGACATCAGTTCGCAATT 2197450 Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896 ||| || | | |||||||| | ||||| || || ||||||||||| || || || || Sbjct 2197451 CATGCCCAACATGTTAACAGGCAAGGCATCGGTGAGGAATTCTTGTTCAATTTTAACAGC 2197510 Query 18897 CTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGA--AGATGTTTAAAC 18954 ||||| || || |||| || |||| || | | | | || ||||| ||| Sbjct 2197511 TTCTGAAATGATTTCGACAATTCGTTCTT--TTGGTGGTTTCTGGACAAGATGACGGAAC 2197568 Query 18955 ATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAAT 19014 |||||||| |||||||||||||| | || ||||| | ||||||||||| |||||| Sbjct 2197569 ATCAAACAAGCAAAATCACAATGCAAGCCTTCGTCACGTGAAATCAATTCATTGGAAAAT 2197628 Query 19015 GTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAA 19074 || || || ||||||| ||| | ||| || | ||| ||||| | |||||| |||| Sbjct 2197629 GTCAATCCCGGCATCAATCCACGTTTCTTAATCCAAAATATGGCAGCAAAACTTCCACTG 2197688 Query 19075 AAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTA 19134 ||||| || ||||| ||||||||||| |||| | |||||| ||| | | |||| ||| Sbjct 2197689 AAGAAAATTCCTTCAACTGCTGCAAATGCAATAATTCTTTCCCCAAAGTTGGCATTCTTA 2197748 Query 19135 TTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATA 19194 | ||||| || | |||||| ||||||||||| || |||||||||| ||| || | | Sbjct 2197749 CTGCTGATCCAGTTAATTGCCCAGTCAGCCTTCTTCTTCACACATGGCAATGTTTCGACA 2197808 Query 19195 GAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAAC-- 19252 | || |||| | | |||||| | || | || | ||| | | ||||||| | Sbjct 2197809 GCGTTGAATAAAAATTCACGCTC-TTTGGAGTTT---CGAATGTAAGTTTCAATAAGCAA 2197864 Query 19253 --TGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGC 19310 |||||||| ||||| | ||| || ||||| || ||||| || ||||| || | ||| Sbjct 2197865 GGAATACATTTCAGAATGTACATTCTCCATAGCTATTTGAAAACCATAAAAGCAGCGTGC 2197924 Query 19311 TTCTGTTATCTGT 19323 ||| || | |||| Sbjct 2197925 TTCAGTAACCTGT 2197937 Score = 105 bits (116), Expect = 8e-18 Identities = 134/182 (74%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 19316 TTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAG 19375 ||| ||| ||||| | ||||||||| || ||||||||||| || || || ||| | Sbjct 2197989 TTACCTGAACTTCCTGGCTAAATCTTTCAACTAAATTTTCATTCACGATGCCGTCAGATG 2198048 Query 19376 CTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTC---ATCTGAGGTTAATG-TA 19431 ||||||| ||||| ||||||||| ||||| || ||| |||| |||| | | Sbjct 2198049 CTGCAAAGAATGCCAATACATGTGAGATAAAGTGACGTTCGGTATCT----TTAAGGCCA 2198104 Query 19432 TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCT 19491 ||||||| || || ||| || || | ||| ||||||||||| |||||||| || || || Sbjct 2198105 TTCCAATGATCAAGATCCTTTGACAGATCAACTTCTTCAACCGTCCAAAATGACGCTTCC 2198164 Query 19492 GC 19493 || Sbjct 2198165 GC 2198166 >seq63 Length=2199633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/191 (71%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 137201 CCAGGAAAAAGAAAATGGTTAAAGATAAAAAAGGATTATTTGAATAATGGCGCTTTAGCT 137260 ||||| ||| | |||||| || |||| || |||||||||| || || || | ||| Sbjct 1654724 CCAGGGAAACGTCGATGGTTGAAAGTAAAGAAAGATTATTTGATGAAAGGAGCGATTGCT 1654783 Query 137261 GATTCTATAGACTTAGTAGTATTAGGTGCTTATTATGGTAAAGGATCAAAGGGTGGTATA 137320 ||||| |||||| || || | || |||| ||||| | |||| || |||||| | | Sbjct 1654784 GATTCAGCAGACTTGGTGGTGCTTGGGGCTTGGTATGGAACAGGAAAAATGGGTGG-ACA 1654842 Query 137321 ATGGCTGTATTTT--TAATGGGATGTTATGATGATAATGATTGTAAATGGAAAACTGTTA 137378 | | ||||| | |||||||||||||| || | | || | |||||||||||| | Sbjct 1654843 GTTTTCG-ATTTTCCTCATGGGATGTTATGACGACGACGCTTCTCTATGGAAAACTGTGA 1654901 Query 137379 CAAAATGTTCA 137389 | ||| ||||| Sbjct 1654902 CGAAA-GTTCA 1654911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561941832607320