Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq43 233 2e-56 >seq43 Length=2293527 Score = 233 bits (258), Expect = 2e-56 Identities = 454/664 (68%), Gaps = 10/664 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| ||||| ||||||||| ||||||||| ||||||| || ||||| || || || Sbjct 2197271 CATCACTCCAGCTTTTTGATACTCTCCAACTTTCTTTTCGAAGAAGTTTGTTTTACCCTC 2197330 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTA-CTACATG 36990 || || || ||||| || || ||||| ||| || || || | | || | Sbjct 2197331 AAGCGAGATGAGCTCCATGAAGCTGAAAGGATTCTTTGTGTTGTAGATTTTTTCGAC-TC 2197389 Query 36991 ATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 ||||| ||||| | ||| |||||||| || ||||||| | |||| ||||| | | Sbjct 2197390 CCAATTCACCGAGAAGACGATCAGCAACAAACTCAATGTATTGAGACATCAGTTCGCAAT 2197449 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | || || | | || || || | ||||| || ||| || ||| ||| | |||| Sbjct 2197450 TCATGCCCAACATGTTAACAGGCAAGGCATCGGTGAGGAATTCTTGTTCAATTTTAACAG 2197509 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTA---A 37167 | ||| || || | ||||| ||||| |||| || | | | | | | | Sbjct 2197510 CTTCTGAAATGATTTCGACAATTCGTTCTT---TTGGTGGTTTCTGGACAAGATGACGGA 2197566 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 ||| ||||| |||||||||||||| || ||||| || | ||||||||||| |||| Sbjct 2197567 ACATCAAACAAGCAAAATCACAATGCAAGCCTTCGTCACGTGAAATCAATTCATTGGAAA 2197626 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 | || ||||| ||||| || || | ||| |||||||||||||| || |||||| |||| Sbjct 2197627 ATGTCAATCCCGGCATCAATCCACGTTTCTTAATCCAAAATATGGCAGCAAAACTTCCAC 2197686 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA-ACTA 37346 |||||||| |||||||||||||||||||| | || | | | || ||||||| | | Sbjct 2197687 TGAAGAAAATTCCTTCAACTGCTGCAAATGCAATAATTCTT-TCCCCAAAGTTGGCATTC 2197745 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | | ||||| || ||| ||| || ||||| || |||||| | |||||| Sbjct 2197746 TTACTGCTGATCCAGTTAATTGCCCAGTCAGCCTTCTTCTTCACACATGGCAATGTTTCG 2197805 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 | || || || | ||| | |||| | | || ||||| ||||| || || Sbjct 2197806 ACAGCGTTGAATAAAAATTCACGCTCTTTGGAGTTTCGAATGTAAGTTTCAATAAGCAAG 2197865 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 |||||||||||| || | ||| || |||||||| |||||||||||||| || | ||| Sbjct 2197866 GAATACATTTCAGAATGTACATTCTCCATAGCTATTTGAAAACCATAAAAGCAGCGTGCT 2197925 Query 37527 TCAG 37530 |||| Sbjct 2197926 TCAG 2197929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592140859698520