Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq51 91.5 4e-14 >seq51 Length=676905 Score = 91.5 bits (100), Expect = 4e-14 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | |||||||||||| | | ||||| | || || ||||| || ||| | | Sbjct 449874 TTCCTGAAGGATGTTATGGTCGTGTTGCTCCACGATCTGGCTTAGCAGCAAAGAACTTTA 449815 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 ||||||| |||||||| || ||||| ||| | | | || |||||||| ||||| | | Sbjct 449814 TTGATGTTGGTGCTGGCGTCATTGACGAAGATTATCGAGGCAACGTTGGCGTTGTAATGT 449755 Query 1078 TTAATTTTAGCGATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTT 1137 ||||| | |||| ||| ||| | ||||||||| ||||| |||||||| | Sbjct 449754 TTAATCATTCCGATCTCGAATTTGCTATAAGCAAAGGTGATAGAATTGCACAGTTAATCT 449695 Query 1138 GTGAA 1142 ||||| Sbjct 449694 GTGAA 449690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138642466046028