Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq48 161 8e-35 seq37 143 2e-29 seq889 129 5e-25 seq4766 113 4e-20 seq11377 109 4e-19 seq17686 87.8 1e-12 >seq48 Length=1955607 Score = 161 bits (178), Expect = 8e-35 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || |||||||| || || ||||| || || ||||||||| | ||| | | Sbjct 847609 ACGCAACACCAAATGAAGTGTTGACTCTTTCTGGATGTTGTAATCGCTAAGAGTACGTCC 847550 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || ||||||||||| || || |||||||| || ||||| ||||||||||||||||| Sbjct 847549 ATCCTCTAATTGCTTACCAGCGAAGATCAAACGTTGCTGATCTGGCGGAATGCCTTCTTT 847490 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| ||| ||| ||| | || | || || || | ||| || ||||| |||| Sbjct 847489 ATCTTGAATCTTTGCTTTGACATTCTCAATCGTATCCGATGGTTCAACCTCAAGGGTGAT 847430 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || || || ||||| || || || |||||| Sbjct 847429 GGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATG 847393 Score = 140 bits (154), Expect = 3e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||||||||| || ||||| ||| | ||| | | Sbjct 645809 ACGGAGAACCAAATGCAAAGTTGATTCTTTTTGAATGTTGTAGTCGCTCAAAGTGCGCCC 645750 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 645749 ATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTT 645690 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||| || ||| |||| | ||||| || | ||| ||||||||||||| Sbjct 645689 GTCTTGGATCTTTGCCTTGACATTTTCAATGGTGTCTGATGGTTCAACTTCAAGAGTGAT 645630 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 645629 AGTCTTGCCAGTCAAAGTTTTAACGAAGATTTGCATG 645593 Score = 140 bits (154), Expect = 3e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||||||||| || ||||| ||| | ||| | | Sbjct 646721 ACGGAGAACCAAATGCAAAGTTGATTCTTTTTGAATGTTGTAGTCGCTCAAAGTGCGACC 646662 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 646661 ATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTT 646602 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||| || ||| || || |||| | |||||||| | ||| |||||||| |||| Sbjct 646601 ATCTTGGATCTTTGCCTTGACGTTTTCGATGGTGTCAGATGGTTCGACTTCAAGGGTGAT 646542 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 646541 GGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATG 646505 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 |||||| || | | ||| | ||| ||||| | || ||||| ||||| || ||||| || Sbjct 621762 ATTTCCACCACGAAGACGGAGAACCAAATGCAAAGTTGATTCCTTTTGGATGTTGTAGTC 621821 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | ||| | |||| || | ||||| || || || |||||||| || || || || Sbjct 621822 GCTCAAAGTGCGACCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGG 621881 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| ||||| || ||||| || ||| || ||| |||| | ||||| || | ||| Sbjct 621882 TGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTAACATTTTCAATCGTGTCTGATGGTTC 621941 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||||||||||| || ||||| || |||||||| || || || |||||| Sbjct 621942 AACTTCAAGAGTGATGGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATG 621993 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||||||||| || ||||| ||| | ||| | | Sbjct 622005 ACGGAGAACCAAATGCAAAGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACC 622064 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 622065 ATCTTCGAGTTGCTTTCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTT 622124 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || ||| |||| | |||||||| | ||| |||||||| |||| Sbjct 622125 GTCTTGGATCTTGGCCTTGACATTTTCAATCGTGTCAGATGGTTCGACTTCAAGGGTGAT 622184 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || |||||||| || ||||| || || || |||||| Sbjct 622185 GGTCTTGCCGGTCAATGTTTTGACGAAGATTTGCATG 622221 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||||||||| || ||||| ||| | ||| | | Sbjct 646493 ACGGAGAACCAAATGCAAAGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACC 646434 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 646433 ATCTTCGAGTTGCTTTCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTT 646374 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || ||| |||| | |||||||| | ||| |||||||| |||| Sbjct 646373 GTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCAGATGGTTCGACTTCAAGGGTGAT 646314 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || |||||||| || ||||| || || || |||||| Sbjct 646313 GGTCTTGCCGGTCAATGTTTTGACGAAGATTTGCATG 646277 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||| ||||| || ||||| ||| | ||| | | Sbjct 646949 ACGGAGAACCAAATGCAAAGTTGATTCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACC 646890 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 646889 ATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTT 646830 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||| || ||| |||| | ||||| || | ||| ||||||||||||| Sbjct 646829 GTCTTGGATCTTTGCCTTAACATTTTCAATCGTGTCTGATGGTTCAACTTCAAGAGTGAT 646770 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 646769 GGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATG 646733 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||||||||| || ||||| ||| | ||| | | Sbjct 647177 ACGGAGAACCAAATGCAAAGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACC 647118 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 647117 ATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTT 647058 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||| || ||| | || | ||||| || | ||| || ||||| |||| Sbjct 647057 GTCTTGGATCTTTGCCTTAACATTCTCAATGGTGTCGGATGGTTCAACCTCAAGGGTGAT 646998 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 646997 GGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATG 646961 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || |||||||| || || ||||| || || ||||||||| | ||| | | Sbjct 850879 ACGCAACACCAAATGAAGTGTTGACTCTTTCTGGATGTTGTAATCGCTAAGAGTACGTCC 850820 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || ||||||||||| || || |||||||| || ||||| || |||||||||||||| Sbjct 850819 ATCCTCTAATTGCTTACCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCTTT 850760 >seq37 Length=1894237 Score = 143 bits (158), Expect = 2e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||| ||||| || ||||| ||| | ||| | | | Sbjct 798723 ACGGAGAACCAAATGCAAAGTTGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTGCGGCC 798782 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || ||||| || ||||| ||||| || Sbjct 798783 ATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATTCCTTCCTT 798842 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||| || ||| |||| | ||||| || | ||| ||||||||||||| Sbjct 798843 GTCTTGGATCTTTGCCTTGACATTTTCAATGGTGTCTGATGGTTCAACTTCAAGAGTGAT 798902 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 798903 AGTCTTGCCAGTCAAAGTTTTAACGAAGATTTGCATG 798939 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| | || ||||||||||| || ||||| ||| | ||| | | Sbjct 798495 ACGGAGAACCAAATGCAAAGTTGATTCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACC 798554 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || |||||||| || || || || ||||| ||||| || Sbjct 798555 ATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTT 798614 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||| || ||| | || | |||||||| | ||| || |||||||||| Sbjct 798615 GTCTTGGATCTTTGCCTTAACATTCTCAATGGTGTCAGATGGTTCAACCTCAAGAGTGAT 798674 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 798675 GGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATG 798711 >seq889 Length=890 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 |||||| || | | ||| | ||| ||||| | || ||||| ||||| || ||||| || Sbjct 318 ATTTCCACCACGAAGACGGAGAACCAAATGCAAAGTTGATTCCTTTTGAATGTTGTAGTC 259 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | ||| | |||| || | |||||| || || || |||||||| || || || || Sbjct 258 GCTCAAAGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGG 199 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| ||||| || ||||| || || ||| || |||| | ||||| || | ||| Sbjct 198 GGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCCGATGGTTC 139 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||||||||| || ||||| || ||||| || || || || ||||| Sbjct 138 AACTTCAAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 88 >seq4766 Length=269 Score = 113 bits (124), Expect = 4e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| || | |||||| || || || |||||||| || || || || ||||| ||||| | Sbjct 244 CATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCT 185 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 ||||||| || || ||| || |||| | ||||| || | ||| ||||||||||||| Sbjct 184 TATCTTGGATCTTGGCTTTGACGTTTTCAATCGTGTCTGATGGTTCAACTTCAAGAGTGA 125 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| || |||||||| || || || ||||| Sbjct 124 TGGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCAT 88 >seq11377 Length=181 Score = 109 bits (120), Expect = 4e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| || | |||||| || || || |||||||| | || || || ||||| ||||| | Sbjct 166 CATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTAGCTGGTCTGGTGGAATTCCTTCCT 107 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 | ||||| || ||| || ||| |||| | ||||| || | ||| ||||||||||||| Sbjct 106 TGTCTTGGATCTTTGCCTTAACATTTTCAATCGTGTCTGATGGTTCAACTTCAAGAGTGA 47 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || |||||||| || || || |||||| Sbjct 46 TGGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATG 9 >seq17686 Length=131 Score = 87.8 bits (96), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 |||||||| || || || || ||||| ||||| || ||||| || || || ||| | Sbjct 131 ATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTC 72 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || | ||| ||||||||||||| || ||||| || |||||||| || Sbjct 71 TCAATGGTGTCTGATGGTTCAACTTCAAGAGTGATGGTCTTGCCAGTCAAAGTTTTGACG 12 Query 101459 AATATCTGCAT 101469 || || ||||| Sbjct 11 AAGATTTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396163633193391