Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq47 113 6e-20 >seq47 Length=5381421 Score = 113 bits (124), Expect = 6e-20 Identities = 203/295 (69%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 ||||| ||||| || || ||||| || || ||||||||| || || | || || Sbjct 2709749 AGATCATCGTCACTGAATCCCGTTCCAATTTTACAAATGCTTTGATATTCTTCATTTTCC 2709808 Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTG 197142 ||| |||||| | || | ||| | ||||| ||||| ||||||||||| || | Sbjct 2709809 TGATCGTAACATCCAAGCAGGAAGCCACCGTAAGTTCCGGTTCTCTTTCCTCTACCTCTA 2709868 Query 197143 AAGCCTCCGATAACCACCAGATCCA--GAGTGTCGCACACCCCTTCCATGTAATCTTTCT 197200 | || || | ||| |||| ||||| || | || ||| || || |||||||||||||| Sbjct 2709869 TAACCACCAAGAACTACCAAATCCAATGAATCTCCCACTCCACT--CATGTAATCTTTCT 2709926 Query 197201 TCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGG 197260 ||| ||| | ||| | || |||| || |||||||| || || || | | | || | Sbjct 2709927 TCAATTTCAACCAATTCCTCGATCGTTTTGCAATCTCATAAGTGGCTTCTTTCTTCAATG 2709986 Query 197261 TCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTG 197315 | || | ||| || || ||||||| | | ||||| || | | | ||| ||||| Sbjct 2709987 TTTTAACCATTAAACCTTCGCAATTTCCTTTCACAGCATCTTCAAGGAACGTTTG 2710041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676528585931440