Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq63 91.5 9e-14 >seq63 Length=2199633 Score = 91.5 bits (100), Expect = 9e-14 Identities = 245/367 (67%), Gaps = 11/367 (3%) Strand=Plus/Plus Query 78224 TTTAATAGTTGGGTGCGGGTCGTAACCATCAATTACGAAATTATCCATTGTGAAATCATC 78283 ||| || ||||||| || ||||| ||| |||| |||||| || | | |||| || || Sbjct 1193743 TTTGATGGTTGGGTAAGGATCGTAGCCAATAATTTCGAAATCCTCAAATTTGAAGTCGTC 1193802 Query 78284 AATGCTTGCTACATGACCAACAATCTTCAGCTCCGGTAAA--ACTTTAGTAATTCGTCTT 78341 ||| || | || |||| |||||| | | || || || | | | ||| Sbjct 1193803 AATATTTTCAACTTGACGTTTAATCTTTAATTGAGGAAATGGACGT--GGCACACGTTCA 1193860 Query 78342 GTCTGTTCCTGTACTTGCGGTATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGA 78401 | ||| | | | | || ||||||||| ||||| ||| || || |||| ||| ||| Sbjct 1193861 ATTTGTGCTTTCAATGGCTCAATATGATTCAAGTAAACATGCGCATCGCCGAGTGTATGA 1193920 Query 78402 ATGAAGTCTCCTACTTCCAG-TCCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTA 78460 || || || || | || || | || | ||| ||||| || | || ||||| || || Sbjct 1193921 ATAAAATCGCCAATTTTAAGATTCGTG-ACATGAGCAATCATGTAAGTGAGTAAAGCATA 1193979 Query 78461 TGAAGCAATGTTAAATGGAATTCCTAAGAAT-ACGTCACCGCTTCGTTGGTACAATTGGC 78519 ||||||||||| || |||| || |||| | |||| | |||||||||||||| | Sbjct 1193980 AGAAGCAATGTTGAAAGGAACACC-AAGACCCATGTCAGCTGAACGTTGGTACAATTGAC 1194038 Query 78520 AACTTAGCTTTCCATCAACTGATACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTG 78579 |||| |||| |||||| | || ||||| || | | |||||||| || | || Sbjct 1194039 AACTAAGCTCACCATCA---GCGACATAAAATTGCACCAAGCAATGACAAGGTGGCAATG 1194095 Query 78580 CCATATC 78586 |||| || Sbjct 1194096 CCATGTC 1194102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300073070193400