Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 3e-13 >seq2 Length=1318413 Score = 89.7 bits (98), Expect = 3e-13 Identities = 175/256 (68%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| ||||| || ||||| | ||||| || | || | |||| ||||||||| Sbjct 930383 CATAAACAAATCGGGGATCCAAAGAGCATAGAACATGTCACGAGCTCGAGCTTCTTCTTT 930324 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 ||| ||| || || || | ||| | ||| |||||||| || ||||| ||||| | || Sbjct 930323 TCCAGTG-TTTTTCTTCAAATCAAGGAACTCAAAAATGTCGCCATGCCAAGGTTCAAGAT 930265 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 | || || ||| ||| | ||| |||||||| || || || | || || | | Sbjct 930264 AAATGGCGAAAGCTCCTGGACGTTTGTTGCCACCTTGGTCGACATAACGAGCTGTGTTGT 930205 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171 | ||||| ||| ||| ||||| | ||| |||||| || ||||||| | ||| | | Sbjct 930204 TATAAACTCTCAGCATGGGAACGAGACCATTTGAAATCCCATTTGTGCCAGCAATGTAGC 930145 Query 26172 ATCCTGTCGATCTAAT 26187 |||| | | || ||| Sbjct 930144 TTCCTTTGGCTCGAAT 930129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252966716690225