Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq67 230 3e-55 >seq67 Length=1615038 Score = 230 bits (254), Expect = 3e-55 Identities = 345/483 (71%), Gaps = 14/483 (3%) Strand=Plus/Plus Query 47689 TCAATACCAACTTCATCAAGACCAGAACCTTCCCATCTAATATTCATATCAAAATAAGGT 47748 |||| ||||||||||||| |||||| || |||| ||| ||| | || || || | Sbjct 292624 TCAACTCCAACTTCATCAACACCAGAGCCACGCCATTCAAT-TTCCTTTCCAATAAATTT 292682 Query 47749 GCA-GATTCCTCAACAAACTGACGGACAGAATATTGATTTC--CTGTGGCAATAACAAAA 47805 | | ||||| |||||||| | |||||| | | | |||| |||| ||||| || ||| Sbjct 292683 GAAAGATTCTTCAACAAATTCTCGGACAC--TGTGGGTTTCTCCTGTTGCAATGACGAAA 292740 Query 47806 TCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGT 47865 || || || | ||| ||| | ||| | |||||| || |||||||| ||||||||||| Sbjct 292741 TCTTCTGGCTTTTCCAATTGCAACATCATCCACATTGCTTCGACATAGTCTCTGGCATGC 292800 Query 47866 CCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG 47925 ||||| || || || |||||||||||| || | | | || || | || | || Sbjct 292801 CCCCAATCGCGCTTTGAATCAAGATTTCCAAGTTCAAGAACTTCCTGTTGT--TTTAAAG 292858 Query 47926 ATTGCTTTT----AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGG 47981 || |||| | | ||||||||| || | ||| || ||| |||| || | ||||| Sbjct 292859 ATA--TTTTGGCGACAGTTCTTGTAATTTTTCTAGTGACGAAATTTTCTCCTCTCCTTGG 292916 Query 47982 AGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTT 48041 ||||| |||||||||||||||||| | || ||| |||| |||||| ||| ||||| || Sbjct 292917 TGATTCGTGATTAAAAAGAATACCATTGCAAGCAAACATATCGTATGCTTCTCGATAATT 292976 Query 48042 CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGG 48101 | || ||||| | ||||| | || ||| |||||||||| | |||||||||||| Sbjct 292977 TATCACAATCCAAAATCCATACATCTTGGCACATGCATAAGGAGATCTTGGATAGAAAGG 293036 Query 48102 TGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTG 48161 || | || || ||||| || || || || |||||||| || ||| |||||||| Sbjct 293037 AGTTTTTTCAGTTTGTGGCGTTTCAACGACTTTCCCATAAAGCTCTGAGGTAGATGCTTG 293096 Query 48162 ATA 48164 ||| Sbjct 293097 ATA 293099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665296723207160