Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq48 104 2e-17 seq37 95.1 8e-15 seq889 93.3 3e-14 seq55 86.0 4e-12 seq4766 82.4 5e-11 >seq48 Length=1955607 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| | |||| |||| || ||||||||||| |||||| Sbjct 646012 TCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCTTCGAGTTGCTTTCCAGCGAAG 645953 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||| ||| | || | || |||||||| | ||||| ||||||| | Sbjct 645952 ATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTT 645893 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | || || |||| ||| |||||||| || || | ||||| || Sbjct 645892 TCGATGGTGTCAGATGGTTCAACTTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACG 645833 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 645832 AAGATTTGCATG 645821 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || |||||||| ||||| | |||| |||| || ||||||||||| |||||| Sbjct 646696 TCTTTTTGAATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAG 646637 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || ||||| || | || ||| |||||| | Sbjct 646636 ATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTTATCTTGGATCTTTGCCTTGACGTTT 646577 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||||| |||| ||| |||||||| || || | || || || Sbjct 646576 TCGATGGTGTCAGATGGTTCGACTTCAAGGGTGATGGTCTTGCCAGTCAAAGTTTTGACG 646517 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 646516 AAGATTTGCATG 646505 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| ||||| | |||| |||| || |||||||| || |||||| Sbjct 647380 TCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTTGCCAGCGAAG 647321 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || || ||||| | ||||| ||||||| | Sbjct 647320 ATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCTTTGACGTTT 647261 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||||| |||| ||| |||||||| || || | || || || Sbjct 647260 TCGATGGTGTCAGATGGTTCGACTTCAAGGGTGATGGTCTTGCCAGTCAAAGTTTTGACG 647201 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 647200 AAGATTTGCATG 647189 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| | |||| |||| || ||||||||||| |||||| Sbjct 622258 TCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAG 622317 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || |||||||| | || ||| |||||| | Sbjct 622318 ATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTT 622377 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||||| |||| ||| || ||||| || || | || || || Sbjct 622378 TCAATGGTGTCAGATGGTTCGACTTCAAGGGTGATAGTCTTGCCGGTCAAAGTTTTGACG 622437 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 622438 AAAATTTGCAT 622448 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| ||||| | |||| |||| || ||||||||||| ||||| Sbjct 622030 TCTTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAA 622089 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || |||||||| | || || ||||| | Sbjct 622090 ATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTT 622149 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| ||| | ||||| |||| ||| |||||||| || || | || || || Sbjct 622150 TCAATCGTGTCAGATGGTTCGACTTCAAGGGTGATGGTCTTGCCGGTCAATGTTTTGACG 622209 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 622210 AAGATTTGCATG 622221 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || |||||||| ||||| | ||||| |||| || ||||||||||| |||||| Sbjct 645784 TCTTTTTGAATGTTGTAGTCGCTCAAAGTGCGCCCATCTTCGAGTTGCTTTCCAGCGAAG 645725 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || |||||||| | || ||| ||||| | Sbjct 645724 ATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTT 645665 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | || || |||| || || ||||| || || | || || || Sbjct 645664 TCAATGGTGTCTGATGGTTCAACTTCAAGAGTGATAGTCTTGCCAGTCAAAGTTTTAACG 645605 Query 34967 AAGATCTGCATGATA 34981 ||||| |||||| || Sbjct 645604 AAGATTTGCATGCTA 645590 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| | |||| |||| || ||||||||||| |||||| Sbjct 646924 TCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAG 646865 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || |||||||| | || ||| || || | Sbjct 646864 ATCAAACGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTAACATTT 646805 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || | || || |||| || |||||||| || || | || || || Sbjct 646804 TCAATCGTGTCTGATGGTTCAACTTCAAGAGTGATGGTCTTGCCAGTCAAAGTTTTGACG 646745 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 646744 AAGATTTGCATG 646733 >seq37 Length=1894237 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/202 (71%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 34777 AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTT 34836 |||| || | ||||| || ||||| ||||| | |||| |||| || |||||||| Sbjct 798283 AATGTTGAT-TCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTT 798341 Query 34837 TCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTG 34896 ||| |||||| ||| |||||||||||| | || | || ||||| || | || ||| Sbjct 798342 TCCAGCGAAGTTCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTTATCTTGGATCTTTGC 798401 Query 34897 TTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956 |||||| | | || | ||| | ||||| |||| ||| |||||||| || || | Sbjct 798402 CTTGACGTTTTCGATGGTGTCAGATGGTTCGACTTCAAGGGTGATGGTCTTGCCAGTCAA 798461 Query 34957 GGTCTTTACAAAGATCTGCATG 34978 || || || ||||| |||||| Sbjct 798462 AGTTTTGACGAAGATTTGCATG 798483 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| | |||| |||| || ||||||||||| |||||| Sbjct 798748 TCCTTTTGAATGTTGTAGTCGCTCAAAGTGCGGCCATCTTCGAGTTGCTTTCCAGCGAAG 798807 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||| ||| | || | || |||||||| | || ||| ||||| | Sbjct 798808 ATCAAACGTTGCTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTT 798867 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | || || |||| || || ||||| || || | || || || Sbjct 798868 TCAATGGTGTCTGATGGTTCAACTTCAAGAGTGATAGTCTTGCCAGTCAAAGTTTTAACG 798927 Query 34967 AAGATCTGCATGATA 34981 ||||| |||||| || Sbjct 798928 AAGATTTGCATGCTA 798942 >seq889 Length=890 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| | |||| |||| || ||||||||||| |||||| Sbjct 278 TCCTTTTGAATGTTGTAGTCGCTCAAAGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAG 219 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || |||||||| | || || ||||||| | Sbjct 218 ATCAAACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTT 159 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | || || |||| || || ||||| || || | ||||| || Sbjct 158 TCAATGGTGTCCGATGGTTCAACTTCAAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACG 99 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 98 AAGATTTGCAT 88 >seq55 Length=2529122 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| |||||||||||||||||||| || | || | || Sbjct 2062112 AGCACAAGATGAAGTGTGGATTCCTTCTGAATGTTATAGTCACTAAGAGTACGACCGTCT 2062053 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||||||||| || ||||||| |||||||| ||| | || | || |||||||| Sbjct 2062052 TCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTGTCT 2061993 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | | || | || | |||||| || | || || ||| Sbjct 2061992 TGGATCTTAGCCTTGACATTTTCAATTGTATCTGATGGCTCGACTTCGAGAGTGATAGTC 2061933 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || || || ||||| ||||| Sbjct 2061932 TTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 2061901 >seq4766 Length=269 Score = 82.4 bits (90), Expect = 5e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 34815 TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCC 34874 |||| |||| || ||||||||||| |||||||||| |||||||||||| | || | | Sbjct 250 TGCGACCATCTTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGAATTC 191 Query 34875 CCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAA 34934 | ||||| || | || || ||||||| | | |||| || | || || |||| Sbjct 190 CTTCCTTATCTTGGATCTTGGCTTTGACGTTTTCAATCGTGTCTGATGGTTCAACTTCAA 131 Query 34935 CGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| || || | || || || ||||| ||||| Sbjct 130 GAGTGATGGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCAT 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325598475599297