Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq48 107 3e-18 >seq48 Length=1955607 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||||| || || ||||| || || |||| || |||| | Sbjct 847395 TGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAACCATCGG 847454 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || ||| ||||||||||||||| || ||||| | Sbjct 847455 ATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAGATCAGC 847514 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||| |||||||| ||| | || | | ||||| || | Sbjct 847515 AACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATTACAACA 847574 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || ||||| || || | ||||| || || || Sbjct 847575 TCCAGAAAGAGTCAACACTTCATTTGGTGTTGCG 847608 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||||| || || || || || || |||| || |||| | Sbjct 622219 TGCAAATCTTCGTCAAAACATTGACCGGCAAGACCATCACCCTTGAAGTCGAACCATCTG 622160 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || ||| || ||||| |||||||| || || | Sbjct 622159 ACACGATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAGC 622100 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || || || ||| | || ||| | | || || | || || || | Sbjct 622099 AACGTTTGATTTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAACA 622040 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | ||||| || Sbjct 622039 TCCAAAAAGAATCAACTTTGCATTTGGT 622012 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||||| || || || || || || |||| || |||| | Sbjct 646279 TGCAAATCTTCGTCAAAACATTGACCGGCAAGACCATCACCCTTGAAGTCGAACCATCTG 646338 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || ||| || ||||| |||||||| || || | Sbjct 646339 ACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAGC 646398 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || || || ||| | || ||| | | || || | || || || | Sbjct 646399 AACGTTTGATTTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAACA 646458 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | ||||| || Sbjct 646459 TCCAAAAAGAATCAACTTTGCATTTGGT 646486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785932879097960