Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq40 86.0 8e-12 >seq40 Length=1500142 Score = 86.0 bits (94), Expect = 8e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGG 201625 |||||||| ||||||| ||||| ||| ||| | |||| | | |||||||||||||| Sbjct 431058 CGTATACCTCAAATTGGTGATAAGTTTGCTTCGCGTCATGGAC-AGAAAGGAACTTGTGG 431000 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTAT 201685 || ||| ||| ||||| ||||| |||||| ||| | || || || ||||| Sbjct 430999 AATTCAATATCGACAGGAAGACATGCCATTTACATGTGAAGGTCTTACACCAGACATTAT 430940 Query 201686 AATCAATCCAAATTGTATACCATCAAGAATGACCAT 201721 ||||||||| || ||| |||||| | ||||| || Sbjct 430939 CATCAATCCACATGCTATTCCATCACGTATGACAAT 430904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655085357267000