Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq48 107 5e-18 >seq48 Length=1955607 Score = 107 bits (118), Expect = 5e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || ||||| ||||| | || || ||| || || || | || Sbjct 847408 CAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAACCATCGGATACGATTGAGAA 847467 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || |||||||| ||||||||| |||||||| ||| ||| || ||| | | |||| Sbjct 847468 TGTCAAAGCAAA-GATTCAAGATAAAGAAGGCATTCCGCCAGATCAGCAACGTTTGATCT 847526 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||| || ||||| || || |||||| | ||| | |||||||||| |||||||||||| Sbjct 847527 TCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATTACAACATCCAGAAAGAGT 847586 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390 | || ||||| | || ||| | ||||| Sbjct 847587 CAACACTTCATTTGGTGTTGCGTCTTCG 847614 Score = 98.7 bits (108), Expect = 2e-15 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| | ||||| ||| |||||||| ||||| Sbjct 647204 CAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTCGAACCATCTGACACCATCGAAAA 647263 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||| ||| || ||||| |||||||||||| || ||| ||| | | |||| Sbjct 647264 CGTCAAAGCCAAA-ATCCAAGACAAAGAAGGAATTCCACCAGACCAGCAACGTTTGATCT 647322 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360 |||| || ||||| | |||||||| | |||||| ||| |||||| |||| ||||| Sbjct 647323 TCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAACATCCAAAAAGA 647380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181460978776723