Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq48 87.8 1e-12 >seq48 Length=1955607 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || |||||||| || || ||||||||||| || || ||||| ||| | || ||||| Sbjct 847391 AACATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAACCA 847450 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| | ||| | || ||| ||| ||| || ||||||||| | || ||| Sbjct 847451 TCGGATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAGAT 847510 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || ||| | | || | || || || |||||||| ||| ||| | |||||||| Sbjct 847511 CAGCAACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATTAC 847570 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||||| || ||||| || ||||| ||||| || ||| Sbjct 847571 AACATCCAGAAAGAGTCAACACTTCATTTGGTGTTG 847606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402213080695904