Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq63 84.2 2e-11 >seq63 Length=2199633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 262/403 (65%), Gaps = 12/403 (3%) Strand=Plus/Plus Query 31156 TCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAAT----TCCCCTGG 31211 || || ||||| | |||| |||||||||||| ||||||| ||| || || Sbjct 1193879 TCAATATGATTCAAGTAAACATGCGCATCGCC----GAGTGTATGAATAAAATCGCCAAT 1193934 Query 31212 TCTTAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAA 31271 | | |||| || | | ||||||| | | | | |||||| || |||||||| Sbjct 1193935 TTTAAGATTCGTGACATGAGCAATCATGTAAGTGAGTAAAGCATAAGAAGCAATGTTGAA 1193994 Query 31272 TGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCC 31331 || ||||| | |||| || || || ||||| || || ||| ||| ||| | | Sbjct 1193995 AGGAACACCAAGACCCATGTCAGCTGAACGTTGGTACAATTGACAACTAAGCTCACCATC 1194054 Query 31332 GGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATC--G 31389 | || |||||||| | || ||||||||| ||||| ||||| | | || ||| Sbjct 1194055 AGCGACATAAAATTGCACCAAGCAATGACAAGGTGGCAATGCCATGT--CGGGAATCTGA 1194112 Query 31390 ACGGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTGGATCACGCTTAATCTCTTCT 31449 | ||||||||||| | | | | || || || |||| | ||||| ||| Sbjct 1194113 ATTGGATTCCAAGCTGTCATGATAATGCGACGGTCAGTGGGATTTCTTTTAATTCGTTCG 1194172 Query 31450 ATCACGGCTGTTATTTGATCGATTCCTTCACCCGTATAATTACTATCACATCCCTTGTAG 31509 || || | | | ||| |||||||||| ||| || |||| | || ||| || Sbjct 1194173 ATAACTTCCTTCAGTTGGTCGATTCCTTTACCAGTGTAATCATCATTGCATGTGCCATAT 1194232 Query 31510 GCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGTCCCA 31552 | ||||| ||||| ||||| ||||| ||||||| ||||||| Sbjct 1194233 TCAGCACCAAAATGACGCCACTGAAAGCCATAAACTGGTCCCA 1194275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512865214534640