Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq64 136 5e-27 seq2 125 9e-24 >seq64 Length=2694604 Score = 136 bits (150), Expect = 5e-27 Identities = 467/711 (66%), Gaps = 43/711 (6%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||| ||| ||||||||||||| |||| |||||| ||||| || ||||| || || || Sbjct 2451620 GTAGACGTTACTTGTGTATGGTTCGAAGCTTTCATTGTTACCTAAAATTTGGGCTGTTGA 2451561 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC--CTTCTCC---TTGATG 110821 || |||||||||||||| || || | | || | | || || | | || | Sbjct 2451560 AGCAGTTGGCATTGGTGCGATTAACAAAGAATTTCTCACGCCATGTTTTGCGATTTTACT 2451501 Query 110822 CGTT--CCTTGAGAACATCCCA---GTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGT 110876 | || |||| | |||||| ||| |||| || |||||| | |||||||| Sbjct 2451500 CTTTAAAGTTGACCA-ATCCCAAAGATCG--GTTG-GC---GTTTCA---TTCCACATGT 2451451 Query 110877 CAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGG 110936 | || || || | |||| ||| | |||||||| | | || ||||| | || | Sbjct 2451450 CGAATTGCAGAATTCCTTTCGACACTGGAGAACCTTGGTAAGTCTCATAAGTTCCAAGTT 2451391 Query 110937 CTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996 |||||| | |||||| || || || | | || ||| || || || || || | Sbjct 2451390 CTTCAGAAAGTTCACAACTTGCTTCTAATGCGCCGAAATAAATTGTCTCGAAAATCTGTT 2451331 Query 110997 CATTCA-TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATC 111054 ||| | | | ||| ||||| |||| ||||| | | | || || |||||| |||| Sbjct 2451330 TATTAAGTTTACTT-GCTTCGGCTGATTCAAAAG-GCATTCTCATCATGATAAATGCATC 2451273 Query 111055 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 111114 || | ||||||||| || | ||||| |||| || ||||| || || ||| || | Sbjct 2451272 GGCTAAACCTTGAACTCCAATTCCAATTGGTCGATGACGCATGTTGGATTTTTTAGC-TT 2451214 Query 111115 CT-CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTG 111173 || | |||||||| || || |||| | || |||||| | | |||||||| | Sbjct 2451213 CTGGTATTGGATAAAAGTTCACATCGATGATTTTATTCAGATTTCTTGCTACAATCTTGG 2451154 Query 111174 TGATTTCATGAAGTTTTTCATAATCA----AAAGTGCGAGTCTCTTCATT---------G 111220 | ||| | | |||||| ||||| ||| | | || ||||||| Sbjct 2451153 CAACTTCCTTCAACTTTTCAAAATCATACGAAATTTC---TC-CTTCATTTTTCGTCACA 2451098 Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||| || | || || || || |||||||| |||||||| |||| |||| | Sbjct 2451097 ACAAACATGTTTAGAGCTATCGAAGCCAAATTACAAACAGCTACTTCATTTTTATTGGAA 2451038 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 || || | ||| ||||| || | || |||| | |||||| || | ||||| |||||| Sbjct 2451037 TATTCAAGAATCTCTGTGCAAAGATTTGAACAATGAATCGTTCCAAGATTCTGTTGGTTT 2450978 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391 || ||||| ||||| ||||| |||||||| ||||| ||||| ||| Sbjct 2450977 GATTTTCGATTGCATGCATCTTTGTAAAGCATGTAAGGCGTTCCCGTTTCC 2450927 >seq2 Length=1318413 Score = 125 bits (138), Expect = 9e-24 Identities = 882/1399 (63%), Gaps = 35/1399 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| | ||| ||||||||||||| |||| |||||| || || | ||||| || || || Sbjct 931250 GTAAACGTTGCTTGTGTATGGTTCGAAGCTTTCATTGTTGCCGAGAATTTGAGCCGTTGA 931191 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||||||||||| ||| | ||||||| || | || || || Sbjct 931190 AGCAGTCGGCATTGGTGCCACCAACAATGAATTACGAACGCCATGCTTAGCAATTTTCTC 931131 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATGTCAAACTG 110883 ||| | | ||| | | || | | | | |||| | | |||||| || | || Sbjct 931130 CTTCAAAGTGGACCAATTCCAAAGATCTGTTGGCGTTTTA---TTCCACATATCGTATTG 931074 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 ||| | |||| || | || || || ||| | || || || | || ||||||| Sbjct 931073 AAGAATTCCTTTAGATACTGGCGATCCTTCATAAGTCTCGTAAGTTCCAAATTCTTCAGC 931014 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | |||||| || || |||| | | ||| ||| || ||||||||||| | ||| | Sbjct 931013 AAGTTCACAACTTGCTTCCAATGCTCCGTAATAAATTGTTTCAAAGATTTGCTGATTAAG 930954 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGAC 111062 | || ||||| || ||||| | | | ||| || ||| || |||| || | | Sbjct 930953 TTTCTGTGCTTCGGGAGATTCAAAAG-GCATTCGCATCATAATGAAAGCATCAGCTAAGC 930895 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACG 111121 ||||||| || | ||||| || | || |||||||| || | || | || | ||| Sbjct 930894 CTTGAACTCCAATTCCAATGGGACGATGACGCATATTTGATCGTTTG-GCTTCCGGAACT 930836 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 ||||| |||| |||||||| | || |||||||| || ||| | ||||| | ||| Sbjct 930835 GGATAGTAATTAACGTCAATGATTTTATTGAGATTTTTTGTGACAGTTTTTGTCACTTCC 930776 Query 111182 TGAAGTTT------TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235 | | ||| |||||||| | | | | | | | || |||| || | | Sbjct 930775 TTTAATTTCTTGAAGTCATAATCCTTACTTCCATTATTTGCAACGACAAACATGTTGACA 930716 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 || ||||| || || || ||||| || ||||| || || || || | ||||||| Sbjct 930715 GCAATTGAAGCTAAGTTACAAACTGCAACTTCATCTTTGCTTGAATATTCAACAATTTCT 930656 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 || |||| || || | ||| || || | |||| ||| || || ||||| Sbjct 930655 GTGCATAGATTTGAGCAACGAATAGTGCCAACGTTCTGTTGATTCGATTTGCGATTGCAA 930596 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 || || || || |||||||| || || || || || ||||| | || || || | Sbjct 930595 GCGTCTTTATAAAGCATGTAAGGAGTTCCAGTTTCAACTTGTGACTCGATGATCGCAAAC 930536 Query 111416 CAAACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 |||| ||| ||| || || || || ||||| || || || || ||| || Sbjct 930535 CAAAGATCTTGAGCTTTCAC-CTGACGAATGTAACGTCCTTCAGCTTCTTATTTTTCATA 930477 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 || || || || |||||| | ||| | | | ||| || | ||||| | Sbjct 930476 AAGTTTCTCGAAATCTTCACCCCAAGTATCGAATAAATTTGGACTGTTATGAGGACACAT 930417 Query 111535 AAGAGACCATTGACCA--CCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 | |||||| ||| ||| ||||| || ||| || | || || ||||| || Sbjct 930416 CAAAGACCACATTCCATTACTT--TCAACACGACGCATAAACAAATCGGGGATCCAAAGA 930359 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAG 111651 | | || | || | | ||||| ||||| | || ||| || | || ||||| Sbjct 930358 GCATAGAACATGTCACGAGCTCGAGCTTCTTCTTTTCCAGTGTT-TTTCTTCAAATCAAG 930300 Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707 |||||| | || || | ||||| || |||||||| | |||| || ||| | || Sbjct 930299 GAACTCAAAAATGTCGCCATGCCAAGGTTCAAGATAAATGGCGAAAGCTCCTGGACGTTT 930240 Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767 | | ||| |||| | ||||| || |||||| |||| | || | ||||| |||| | Sbjct 930239 GTTG-CCACCTTGGTCGACATAACGAGCTGTGTTGTTATAAACTCTCAGCATGGGAACGA 930181 Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATT-TATTGGCTCTCACATCATGG 111826 ||||| ||| |||||||| || ||| || || ||||||| | ||| Sbjct 930180 GACCATTTGAAATCCCATTTGTGCCAGCAAT-GTAGCTTCCTTTGGCTCGAATGCAATGA 930122 Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886 | | | ||||| || || || | || ||| | ||| | | | ||||||||| Sbjct 930121 ACATTTAATCCAATGCCTCCTGCTGATTTACTGATCAATGAACATTGCATGAGAGTTCCA 930062 Query 111887 TAGATACCGTTGATTGAGTCCTC-CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 || || || | || || ||||| ||| | |||| ||| || |||| || || Sbjct 930061 TAAATGCCTTCAATAGAATCCTCGGACATTGACAATAA-GAAACATGAAGACAATTGTGG 930003 Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACA 112004 || ||||| |||| |||||| ||||| | || || |||| ||| | || |||| Sbjct 930002 TCGAGGTGTTGCAGCTGCGAAGAGTGTTGGAGAGGCATGCGTGAA-ATATCGTTCCGACA 929944 Query 112005 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCC 112064 | ||| || || | | | |||||| ||||| || || ||||| | || || | Sbjct 929943 ATAAATTGTAAGTTTCAATTGCTGCATCAATATCTTCGCCATGAATGCCAACAGCAACTC 929884 Query 112065 GCATGAACATGTACTGTGG 112083 |||| ||||| | ||||| Sbjct 929883 GCATTAACATATGTTGTGG 929865 Score = 104 bits (114), Expect = 3e-17 Identities = 466/730 (64%), Gaps = 20/730 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| | ||| ||||||||||||| |||| |||||| || || | ||||| || || || Sbjct 923133 GTAAACGTTGCTTGTGTATGGTTCGAAGCTTTCATTGTTGCCGAGAATTTGAGCCGTTGA 923074 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||||||||||| ||| | ||||||| || | || || || Sbjct 923073 AGCAGTCGGCATTGGTGCCACCAACAATGAATTACGAACGCCATGCTTAGCAATTTTCTC 923014 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATGTCAAACTG 110883 ||| | | ||| | | || | | | | |||| | | |||||| || | || Sbjct 923013 CTTCAAAGTGGACCAATTCCAAAGATCTGTTGGCGTTTTA---TTCCACATATCGTATTG 922957 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 ||| | |||| || | || || || ||| | || || || | || ||||||| Sbjct 922956 AAGAATTCCTTTAGATACTGGCGATCCTTCATAAGTCTCGTAAGTTCCAAATTCTTCAGC 922897 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | |||||| || || |||| | | ||| ||| || ||||||||||| | ||| | Sbjct 922896 AAGTTCACAACTTGCTTCCAATGCTCCGTAATAAATTGTTTCAAAGATTTGCTGATTAAG 922837 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGAC 111062 | || ||||| || ||||| | | | ||| || ||| || |||| || | | Sbjct 922836 TTTCTGTGCTTCGGGAGATTCAAAAG-GCATTCGCATCATAATGAAAGCATCAGCTAAGC 922778 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA--CTTTCGC-GCAGTCTCAA 111119 ||||||| || | ||||| || | || |||||||| || ||| || ||| || Sbjct 922777 CTTGAACTCCAATTCCAATGGGACGATGACGCATATTTGATCGTTTGGCTTCAG---GAA 922721 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | ||||| |||| |||||||| | || |||||||| || ||| | ||||| | || Sbjct 922720 CTGGATAGTAATTAACGTCAATGATTTTATTGAGATTTTTTGTGACAGTTTTTGTCACTT 922661 Query 111180 CATGAAGTTT------TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAA 111233 | | | ||| |||||||| | | | | | | | || |||| || | | Sbjct 922660 CCTTTAATTTCTTGAAGTCATAATCCTTACTTCCATTATTTGCAACGACAAACATGTTGA 922601 Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293 || ||||| || || || ||||| || ||||| || || || || | ||||| Sbjct 922600 CAGCAATTGAAGCTAAGTTACAAACTGCAACTTCATCTTTGCTTGAATATTCAACAATTT 922541 Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353 |||| |||| || || | ||| || || | |||| ||| || || |||| Sbjct 922540 CTGTGCATAGATTTGAGCAACGAATAGTGCCAACGTTCTGTTGATTCGATTTGCGATTGC 922481 Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413 | || || || || |||||||| || || || || || ||||| | || || || Sbjct 922480 AAGCGTCTTTATAAAGCATGTAAGGAGTTCCAGTTTCAACTTGTGACTCGATGATCGCAA 922421 Query 111414 TCCAAACATC 111423 ||||| ||| Sbjct 922420 ACCAAAGATC 922411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627845450944800