Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 154 2e-32 >seq2 Length=1318413 Score = 154 bits (170), Expect = 2e-32 Identities = 781/1230 (63%), Gaps = 21/1230 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||||| ||||| || || | || |||||||| ||||| |||||| | | Sbjct 929865 CCACAACATATGTTAATGCGAGTTGCTGTTGGCATTCATGGCGAAGATATTGATGCAGCA 929924 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || ||| | |||| || | ||| |||| || || | ||||| ||||| Sbjct 929925 ATTGAAACTTACAATTTATTGTCGGAACGATAT-TTCACGCATGCCTCTCCAACACTCTT 929983 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG-GAGG 104399 | |||| ||||| |||| ||| |||| || ||| |||| | ||| |||| Sbjct 929984 CGCAGCTGCAACACCTCGACCACAATTGTCTTCATGTTTC-TTATTGTCAATGTCCGAGG 930042 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || || | || || ||||||||||| | | | ||| | ||| || | || | Sbjct 930043 ATTCTATTGAAGGCATTTATGGAACTCTCATGCAATGTTCATTGATCAGTAAATCAGCAG 930102 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATA-AATCTCGTATTCGGGGGACA 104518 | || ||||| | | | ||| | ||||||| || || ||| || ||| Sbjct 930103 GAGGCATTGGATTAAATGTTCATTGCATTCGAGCCAAAGGAAGCTAC-ATTGCTGGCACA 930161 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 ||||| ||| ||||| | |||| ||||| | || | |||| |||||| || ||| Sbjct 930162 AATGGGATTTCAAATGGTCTCGTTCCCATGCTGAGAGTTTATAACAACACAGCTCGTTAT 930221 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | |||| ||| | | || | ||| || |||| | |||||||| || ||||| Sbjct 930222 GTCGACCAAGGTGG-CAACAAACGTCCAGGAGCTTTCGCCATTTATCTTGAACCTTGGCA 930280 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 | || || | ||||||||||| ||| ||| || | || || || || Sbjct 930281 TGGCGACATTTTTGAGTTCCTTGATTTGAAGAAAAACACTGGAAAAGAAGAAGCTCGAGC 930340 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 || || | |||| ||||| ||||| || ||| | || ||| | ||||| | Sbjct 930341 TCGTGACATGTTCTATGCTCTTTGGATCCCCGATTTGTTTATGCGTCGTGTTGAAAGTAA 930400 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | |||||| | | ||||| | || || | | | |||| | |||||| Sbjct 930401 TGGAATGTGGTCTTTGATGTGTCCTCATAACAGTCCAAATTTATTCGATACTTGGGGTGA 930460 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC-GGTGC 104873 || || || ||||| ||| || || | ||||| || | | || | |||| Sbjct 930461 AGATTTCGAGAAACTTTATGAAAAATAAGAAGCTGAAGGACGTTACATT-CGTCAGGTGA 930519 Query 104874 CAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933 |||| ||| | ||| || || || |||| ||| || ||||| || || |||| Sbjct 930520 AAGCTCAAGATCTTTGGTTTGCGATCATCGAGTCACAAGTTGAAACTGGAACTCCTTACA 930579 Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993 ||||||| |||||||| || || | || |||||| |||| | || || Sbjct 930580 TGCTTTATAAAGACGCTTGCAATCGCAAATCGAATCAACAGAACGTTGGCACTATTCGTT 930639 Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053 | || ||||| || |||||||| | |||| | || ||||||||| || || |||| Sbjct 930640 GCTCAAATCTATGCACAGAAATTGTTGAATATTCAAGCAAAGATGAAGTTGCAGTTTGTA 930699 Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT-TTGATTAT 105112 || | || ||||| ||| || || || ||| | | || | | | || | |||||| Sbjct 930700 ACTTAGCTTCAATTGCTGTCAACATGTTTGTCGTTGCAAATA-ATGGAAGTAAGGATTAT 930758 Query 105113 G------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 | | ||| | | ||||| || ||||||||||| ||||| || || | | | ||| Sbjct 930759 GACTTCAAGAAATTAAAGGAAGTGACAAAAACTGTCACAAAAAATCTCAATAAAATCATT 930818 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || |||| || || ||| | || ||| |||||| | || ||||| ||| Sbjct 930819 GACGTTAATTACTATCCAGTTCCGGAAGCCAAACGATCAAATATGCGTCATCGTCCCATT 930878 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 || | || ||||| || | || |||| |||||| | || | ||||| || Sbjct 930879 GGAATTGGAGTTCAAGGCTTAGCTGATGCTTTCATTATGATGCGAATGCCTTTTGAATCT 930938 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 |||||| || || | ||| || || ||||| || || ||| ||| || | || Sbjct 930939 CCCGAAGCACAGAAACTTAATCAGCAAATCTTTGAAACAATTTATTACGGAGCATTGGAA 930998 Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 || |||| || | || || | ||| | || || || | ||| || || |||| Sbjct 930999 GCAAGTTGTGAACTTGCTGAAGAATTTGGAACTTACGAGACTTATGAAGGATCGCCAGTA 931058 Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGG 105436 || |||| | ||||||| ||||||||| Sbjct 931059 TCTAAAGGAATTCTTCAATACGATATGTGG 931088 Score = 113 bits (124), Expect = 5e-20 Identities = 565/892 (63%), Gaps = 21/892 (2%) Strand=Plus/Plus Query 104560 TAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAG 104615 |||| |||||| || ||||| | |||| ||| | | || | ||| || |||| Sbjct 922086 TAACAACACAGCTCGTTATGTCGACCAAGGTGG-CAACAAACGTCCAGGAGCTTTCGCCA 922144 Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 | |||||||| || ||||| | || || | ||||||||||| ||| ||| | Sbjct 922145 TTTATCTTGAACCTTGGCATGGCGACATTTTTGAGTTCCTTGATTTGAAGAAAAACACTG 922204 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 | | || || || || || || | |||| ||||| ||||| || ||| | || | Sbjct 922205 GAAAAGAAGAAGCTCGAGCTCGTGACATGTTCTATGCTCTTTGGATCCCCGATTTGTTTA 922264 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795 || | ||||| | ||| | |||||| | | ||||| | || || | Sbjct 922265 TGCGTCGTGTTGAAAGTAATGGAATGTGGTCTTTGATGTGTCCTCATAACAGTCCAAATT 922324 Query 104796 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC 104855 | | |||| | |||||| || || || ||||| ||| || || | ||||| | Sbjct 922325 TATTCGATACTTGGGGTGAAGATTTCGAGAAACTTTATGAAAAATAAGAAGCTGAAGGAC 922384 Query 104856 GGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACC 104914 | | | || | |||| |||| ||| | ||| || || || |||| ||| Sbjct 922385 GTTACATT-CGTCAGGTGAAAGCTCAAGATCTTTGGTTTGCGATCATCGAGTCACAAGTT 922443 Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 || ||||| || || ||||||||||| |||||||| || || | || |||||| || Sbjct 922444 GAAACTGGAACTCCTTACATGCTTTATAAAGACGCTTGCAATCGCAAATCGAATCAACAG 922503 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 || | || || | || ||||| || |||||||| | |||| | || |||| Sbjct 922504 AACGTTGGCACTATTCGTTGCTCAAATCTATGCACAGAAATTGTTGAATATTCAAGCAAA 922563 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 ||||| || || |||||| | || ||||| ||| || || || ||| | | || | Sbjct 922564 GATGAAGTTGCAGTTTGTAACTTAGCTTCAATTGCTGTCAACATGTTTGTCGTTGCAAAT 922623 Query 105095 ACAAAGACAT-TTGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAA 105147 | | || | ||||||| | ||| | | ||||| || ||||||||||| || Sbjct 922624 A-ATGGAAGTAAGGATTATGACTTCAAGAAATTAAAGGAAGTGACAAAAACTGTCACAAA 922682 Query 105148 AAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATC 105204 ||| || || | | | ||||| |||| || || || ||| | || ||| Sbjct 922683 AAATCTCAATAAAATCATTGACGTTAATTACTATCCAGTTCCTGAAGCCAAACG---ATC 922739 Query 105205 TAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT 105264 |||||| | || ||||| ||||| | || ||||| || | || |||| |||||| | Sbjct 922740 AAATATGCGTCATCGTCCCATTGGAATTGGAGTTCAAGGCTTAGCTGATGCTTTCATTAT 922799 Query 105265 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGAC 105324 || | ||||| || |||||| || || | ||| || || ||||| || Sbjct 922800 GATGCGAATGCCTTTTGAATCTCCCGAAGCACAGAAACTTAATCAGCAAATCTTTGAAAC 922859 Query 105325 CATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGA 105384 || ||| ||| || | || || |||| || | || || | ||| | || || Sbjct 922860 AATTTATTACGGAGCATTGGAAGCAAGTTGTGAACTTGCTGAAGAATTTGGAACTTACGA 922919 Query 105385 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG 105436 || | ||| || || |||| || |||| | ||||||| ||||||||| Sbjct 922920 GACTTATGAAGGATCGCCAGTATCTAAAGGAATTCTTCAATACGATATGTGG 922971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583087549670120