Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq63 98.7 8e-16 >seq63 Length=2199633 Score = 98.7 bits (108), Expect = 8e-16 Identities = 207/306 (68%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 111631 AAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTT 111690 || |||||||| ||||| |||||||| |||| || ||||| || ||| Sbjct 1193795 AAGTCGTCAATATTTTCAACTTGACGTTTAATCTTTAATTGAGGAAATGGACGTGGCACA 1193854 Query 111691 CGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATA 111750 || || ||| || || |||| || ||||| || |||||||||||||| || | Sbjct 1193855 CGTTCAATTTGTGCTTTCAATGGCTCAATATGATTCAAGTAAACATGCGCATCGCCGAGT 1193914 Query 111751 CAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGA 111810 ||| || || || | | | | | |||| || ||||||||||| ||||||| | Sbjct 1193915 GTATGAATAAAATCGCCAATTTTAAGATTCGTGACATGAGCAATCATGTAAGTGAGTAAA 1193974 Query 111811 CTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGC 111870 ||| ||||||||| || || ||||| || ||||| || | || | ||| || | Sbjct 1193975 GCATAAGAAGCAATGTTGAAAGGAACACCAAGACCCATGTCAGCTGAACGTTGGTACAAT 1194034 Query 111871 TGACATGATAGTTTATTTTGTGACACATAAAATTG-ACAAAGTACATGACAAGGAGGCAA 111929 ||||| || | | | | ||||||||||| || ||| | ||||||||| ||||| Sbjct 1194035 TGACAACTAAGCTCACCATCAGCGACATAAAATTGCACCAAGCA-ATGACAAGGTGGCAA 1194093 Query 111930 TGCCAT 111935 |||||| Sbjct 1194094 TGCCAT 1194099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391832088022369