Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq37 159 3e-34 seq48 158 1e-33 seq889 149 5e-31 seq75 141 8e-29 seq11377 111 1e-19 seq4766 109 5e-19 seq17686 102 7e-17 >seq37 Length=1894237 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| |||||| |||| ||||||||||| ||||| || Sbjct 798939 CATGCAAATCTTCGTTAAAACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAACCATC 798880 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| ||| || |||||||| ||||| || || || ||||| Sbjct 798879 AGACACCATTGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCA 798820 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || ||| | ||||| | || | ||| ||||| Sbjct 798819 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGCCGCACTTTGAGCGACTACAA 798760 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||| || || || ||||||||| | ||| | || |||||||| Sbjct 798759 CATTCAAAAGGAATCAACTTTGCATTTGGTTCTCCGTCTTCGTGGTGGCAT 798709 >seq48 Length=1955607 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| ||||||||||| |||| || |||||||| ||||| || Sbjct 622448 ATGCAAATTTTCGTCAAAACTTTGACCGGCAAGACTATCACCCTTGAAGTCGAACCATCT 622389 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| || |||||||| ||||| || ||||| || || Sbjct 622388 GACACCATTGAAAACGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAG 622329 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || || ||| | ||||| || || | ||| |||||| Sbjct 622328 CAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAAC 622269 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || || ||||||||| | ||| | || |||||||| Sbjct 622268 ATCCAAAAGGAATCAACTTTGCATTTGGTTCTCCGTCTCCGTGGTGGCAT 622219 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| |||||| |||| ||||||||||| ||||| || Sbjct 645593 CATGCAAATCTTCGTTAAAACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAACCATC 645652 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| ||| || |||||||| ||||| || || || || || Sbjct 645653 AGACACCATTGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCA 645712 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || ||| | ||||| | || | ||| ||||| Sbjct 645713 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGGCGCACTTTGAGCGACTACAA 645772 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||| || || || || ||||||||| | ||| | || |||||||| Sbjct 645773 CATTCAAAAAGAATCAACTTTGCATTTGGTTCTCCGTCTTCGCGGTGGCAT 645823 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| |||||| | || ||||||||||| ||||| || Sbjct 646733 CATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACTCTTGAAGTTGAACCATC 646792 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || || ||| || |||||||| ||||| || ||||| || || Sbjct 646793 AGACACGATTGAAAATGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 646852 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || ||| | ||||| || || | ||| ||||| Sbjct 646853 GCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 646912 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| |||||||| || || || ||||||||| | ||| | || || ||||| Sbjct 646913 CATCCAAAAGGAATCAACTTTGCATTTGGTTCTCCGTCTTCGTGGCGGCAT 646963 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || ||||| ||||||||||| | || || |||||||| ||||| || Sbjct 622221 CATGCAAATCTTCGTCAAAACATTGACCGGCAAGACCATCACCCTTGAAGTCGAACCATC 622162 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | ||||| || || |||||||| ||||| || ||||| || || Sbjct 622161 TGACACGATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 622102 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || ||| | ||||| || || | ||| ||||| Sbjct 622101 GCAACGTTTGATTTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 622042 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||| || || || || ||||||||| | ||| | || |||||||| Sbjct 622041 CATCCAAAAAGAATCAACTTTGCATTTGGTTCTCCGTCTTCGTGGTGGCAT 621991 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| |||||| | || ||||||||||| ||||| || Sbjct 621993 CATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACTCTTGAAGTTGAACCATC 621934 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || || ||| || |||||||| ||||| || ||||| || || Sbjct 621933 AGACACGATTGAAAATGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 621874 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || || | ||||| || || | ||| ||||| Sbjct 621873 GCAACGTTTGATCTTCGCTGGAAAGCAGCTCGAAGATGGTCGCACTTTGAGCGACTACAA 621814 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| |||||||| || || || ||||||||| | ||| | || ||||| Sbjct 621813 CATCCAAAAGGAATCAACTTTGCATTTGGTTCTCCGTCTTCGTGGTGG 621766 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || ||||| |||| || || | || || ||||| || ||||| || Sbjct 847393 CATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATCACCCTTGAGGTTGAACCATC 847452 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || ||||||||| |||||| ||| |||||||| ||||||||||| || || ||||| Sbjct 847453 GGATACGATTGAGAATGTCAAAGCAAAGATTCAAGATAAAGAAGGCATTCCGCCAGATCA 847512 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || ||||| || || | || || ||||||||| Sbjct 847513 GCAACGTTTGATCTTCGCTGGTAAGCAATTAGAGGATGGACGTACTCTTAGCGATTACAA 847572 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || || ||||| || | |||||||| |||||| | || ||||| Sbjct 847573 CATCCAGAAAGAGTCAACACTTCATTTGGTGTTGCGTCTTCGTGGTGG 847620 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| || || || |||||| |||| |||||| | || || |||||||| ||||| Sbjct 646502 CGGCATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTCGAACC 646561 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | || || | ||||| ||| || ||||| || ||||| || || || || Sbjct 646562 ATCTGACACCATCGAAAACGTCAAGGCAAAGATCCAAGATAAGGAAGGAATTCCCCCAGA 646621 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || || ||||| || | ||| || || ||| | ||||| || || | ||| || Sbjct 646622 CCAGCAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTA 646681 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||| || || || || ||||||||| | ||| | || |||||||| Sbjct 646682 CAACATTCAAAAAGAATCAACTTTGCATTTGGTTCTCCGTCTCCGTGGTGGCAT 646735 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || ||||| ||||||||||| | || || |||||||| ||||| || Sbjct 646277 CATGCAAATCTTCGTCAAAACATTGACCGGCAAGACCATCACCCTTGAAGTCGAACCATC 646336 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || || || |||||||| ||||| || ||||| || || Sbjct 646337 TGACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 646396 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| || || ||| | ||||| || || | ||| ||||| Sbjct 646397 GCAACGTTTGATTTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 646456 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||| || || || || ||||||||| | ||| | || || ||||| Sbjct 646457 CATCCAAAAAGAATCAACTTTGCATTTGGTTCTCCGTCTTCGTGGCGGCAT 646507 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| |||||| | || || |||||||| ||||| || Sbjct 647189 CATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTCGAACCATC 647248 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | |||||| ||||| |||||||||||||| || ||||| || || Sbjct 647249 TGACACCATCGAAAACGTCAAAGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCA 647308 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | ||| ||||| ||| | ||||| || || | ||| ||||| Sbjct 647309 GCAACGTTTGATCTTCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAA 647368 Query 27167 CATTCAAAAGGA 27178 ||| ||||| || Sbjct 647369 CATCCAAAAAGA 647380 >seq889 Length=890 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| |||||| |||| ||||||||||| ||||| || Sbjct 88 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTTGAAGTTGAACCATCG 147 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || |||||||| ||||| || || || || || Sbjct 148 GACACCATTGAAAACGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 207 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || || ||| | ||||| || || | ||| |||||| Sbjct 208 CAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACTTTGAGCGACTACAAC 267 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||| || || || ||||||||| | ||| | || ||||| Sbjct 268 ATTCAAAAGGAATCAACTTTGCATTTGGTTCTCCGTCTTCGTGGTGG 314 >seq75 Length=1896271 Score = 141 bits (156), Expect = 8e-29 Identities = 210/295 (71%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGA-GAAGGCAAAATGCA 135519 |||||||| |||||||| || ||||| || ||||| | |||| ||| |||| Sbjct 1090228 ACGCATGATGATTTGTGGAATGCTGCACAGAATCAA-TTAAGAGTCGAAGCTAAATTGCA 1090170 Query 135520 CGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGA 135579 |||||| | || ||||||||||| || ||||| ||||||||| | ||| |||| ||| Sbjct 1090169 CGGATTCCTACGAATGTATTGGGCGAAGAAGATTTTGGAATGGACAGCAAGTCCTGAAGA 1090110 Query 135580 GGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAA 135639 || | | || || | | | |||||| ||| | |||||||| || ||| | || Sbjct 1090109 AGCTTTGGAGACGGCGATTTATCTCAATGATCGCTATAACTTAGATGGTCGTGATCCCAA 1090050 Query 135640 TGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCG 135699 |||||| || || ||||||||| || |||| | || |||||||| ||| ||||| Sbjct 1090049 TGGCTATGTCGGCTGTATGTGGAGCATCGGCGGCATTCATGATCAAGGTTGGGGCGAGCG 1089990 Query 135700 CAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTT 135754 || || |||||||| || || ||||||||||| || |||| | | || ||| Sbjct 1089989 AGCTGTCTTCGGCAAGATCCGTTACATGAACTATGAAGGATGTAAACGCAAGTTT 1089935 >seq11377 Length=181 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| |||||| | || ||||||||||| ||||| || Sbjct 9 CATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACTCTTGAAGTTGAACCATC 68 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || || ||| || |||||||| ||||| || ||||| || || Sbjct 69 AGACACGATTGAAAATGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 128 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 | ||||| || | ||| || || ||| | ||||| Sbjct 129 GCTACGTTTGATCTTCGCTGGAAAGCAACTCGAAGA 164 >seq4766 Length=269 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| |||||| | || ||||||||||| ||||| || Sbjct 88 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACTCTTGAAGTTGAACCATCA 147 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | |||||| || || ||||| || ||||| || || || || || Sbjct 148 GACACGATTGAAAACGTCAAAGCCAAGATCCAAGATAAGGAAGGAATTCCCCCAGACCAG 207 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 || ||||| || | ||| || || ||| | ||||| Sbjct 208 CAACGTTTGATCTTCGCTGGAAAGCAACTCGAAGA 242 >seq17686 Length=131 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| |||||| | || ||||||||||| ||||| || Sbjct 1 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACCATCACTCTTGAAGTTGAACCATCA 60 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || |||||||| ||||| || ||||| || || Sbjct 61 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAG 120 Query 27108 CAGCGTTTAAT 27118 || ||||| || Sbjct 121 CAACGTTTGAT 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434789212925760