Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq63 89.7 4e-13 >seq63 Length=2199633 Score = 89.7 bits (98), Expect = 4e-13 Identities = 211/312 (68%), Gaps = 24/312 (8%) Strand=Plus/Plus Query 126075 TCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCA 126134 || |||||||| | |||| ||| ||||| || | ||||||||| || || || | | | Sbjct 1193879 TCAATATGATTCAAGTAAACATGCGCATCGCCGAGTGTATGAATAAAATCGCCAATTTTA 1193938 Query 126135 AGTCCACATTCTTT---TGCAACAAG-ATGT--GTCAGTAAAGCATAACTTGCAATATTG 126188 || |||| | || | ||| |||| || |||||||||||| ||||| ||| Sbjct 1193939 AG-----ATTCGTGACATG-AGCAATCATGTAAGTGAGTAAAGCATAAGAAGCAATGTTG 1193992 Query 126189 AAAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCC 126248 ||||||||||| | | || ||||| | ||| || ||||||||| | | | ||| Sbjct 1193993 AAAGGAACACCAAGACCCATGTCAGCTGAACGTTGGTACAATTGACAACTAAGCTCACCA 1194052 Query 126249 TCTTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCG---ATT 126305 || || |||||||| | || || |||||||| |||||||| ||| || Sbjct 1194053 TCAGCGACATAAAATTGCACCAAGCAATGACAAGGTGGCAATGCCAT---GTCGGGAATC 1194109 Query 126306 TCAGTAGGATTCCATGCTG---AAACAATGTGACGTCGAGAGTTTGGATTGGTTTTAATT 126362 | | | |||||||| |||| | |||| |||| || | ||||| |||||||| Sbjct 1194110 TGAATTGGATTCCAAGCTGTCATGATAATGCGACGGTCAG---TGGGATTTCTTTTAATT 1194166 Query 126363 TGTTGTATAACT 126374 ||| |||||| Sbjct 1194167 CGTTCGATAACT 1194178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408480065178941