Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq63 82.4 7e-11 >seq63 Length=2199633 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||||||||| |||||||| ||||| | ||| ||| |||||||||||| || || || | Sbjct 1193947 GACATGAGCAATCATGTAAGTGAGTAAAGCATAAGAAGCAATGTTGAAAGGAACACCAAG 1194006 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| | || ||||| || | || || ||||| |||| ||||| || || Sbjct 1194007 ACCCATGTCAGCTGAACGTTGGTACAATTGACAACTAAGCTCACCATCAGCGACATAAAA 1194066 Query 6736 TTG 6738 ||| Sbjct 1194067 TTG 1194069 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 ||||| || ||||| |||| ||||| || || | || ||||| || | |||||| Sbjct 1194069 CAATTTTATGTCGCTGATGGTGAGCTTAGTTGTCAATTGTACCAACGTTCAGCTGACATG 1194010 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || | || || || |||||||||||| ||| ||| | ||||| |||||||| |||||| Sbjct 1194009 GGTCTTGGTGTTCCTTTCAACATTGCTTCTTATGCTTTACTCACTTACATGATTGCTCAT 1193950 Query 34727 GTC 34729 ||| Sbjct 1193949 GTC 1193947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448129249257360