Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq43 205 1e-47 seq2190 183 3e-41 seq15131 143 3e-29 seq6382 120 3e-22 >seq43 Length=2293527 Score = 205 bits (226), Expect = 1e-47 Identities = 436/650 (67%), Gaps = 6/650 (1%) Strand=Plus/Plus Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 ||||||||| || ||||| ||||||| || ||||| |||||||| | || || Sbjct 2197283 TTTTTGATACTCTCCAACTTTCTTTTCGAAGAAGTTTGTTTTACCCTCAAGCGAGATGAG 2197342 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAA 23336 ||||| || || ||||| || || || | || | ||||| | Sbjct 2197343 CTCCATGAAGCTGAAAGGATTCTTTGTGTTGTAGATTTTTTCGACTCCCAATTCACCGAG 2197402 Query 23337 AAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAG 23396 ||| | ||| || ||||| ||||| |||||| |||||| || | || || || | | Sbjct 2197403 AAGACGATCAGCAACAAACTCAATGTATTGAGACATCAGTTCGCAATTCATGCCCAACAT 2197462 Query 23397 TTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTAT 23456 || || || | ||||| | |||| || |||||| |||||| ||| ||| || Sbjct 2197463 GTTAACAGGCAAGGCATCGGTGAGGAATTCTTGTTCAATTTTAACAGCTTCTGAAATGAT 2197522 Query 23457 TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTA---AACAATAAACATGC 23513 || ||||| ||||| | ||||| | | | | | | |||| ||||| || Sbjct 2197523 TTCGACAATTCGTTCTT---TTGGTGGTTTCTGGACAAGATGACGGAACATCAAACAAGC 2197579 Query 23514 AAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGG 23573 |||||||||||| | |||||| || | |||||||||||| |||||||| ||||| || Sbjct 2197580 AAAATCACAATGCAAGCCTTCGTCACGTGAAATCAATTCATTGGAAAATGTCAATCCCGG 2197639 Query 23574 CATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACC 23633 ||| ||||| ||||| |||||||||||||| |||||||| ||| |||||||| || Sbjct 2197640 CATCAATCCACGTTTCTTAATCCAAAATATGGCAGCAAAACTTCCACTGAAGAAAATTCC 2197699 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693 ||||| || ||||| || | || | | ||||| | ||||| | | ||||| Sbjct 2197700 TTCAACTGCTGCAAATGCAATAATTCTTTCCCCAAAGTTGGCATTCTTACTGCTGATCCA 2197759 Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAG 23753 || ||| ||| | ||||||| || ||||| | |||||| | || || || | Sbjct 2197760 GTTAATTGCCCAGTCAGCCTTCTTCTTCACACATGGCAATGTTTCGACAGCGTTGAATAA 2197819 Query 23754 AAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813 ||| |||| | | || || || ||||| || || |||||||||||| Sbjct 2197820 AAATTCACGCTCTTTGGAGTTTCGAATGTAAGTTTCAATAAGCAAGGAATACATTTCAGA 2197879 Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAG 23863 ||| | ||| || ||||| || ||||| |||||||| || | ||||||| Sbjct 2197880 ATGTACATTCTCCATAGCTATTTGAAAACCATAAAAGCAGCGTGCTTCAG 2197929 >seq2190 Length=457 Score = 183 bits (202), Expect = 3e-41 Identities = 203/270 (75%), Gaps = 18/270 (7%) Strand=Plus/Plus Query 8351 CTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCG 8410 ||||||| |||| |||||| || |||| | | |||||||||||| || ||||| || Sbjct 10 CTGTTGCACAGGGTGGAGTACAATGGCACCAAATTTGCTCACTGCAACATCTGCCTCACG 69 Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA---------GGC 8461 ||||||||| ||| ||| ||||||||||| |||||| ||| | || | | Sbjct 70 GGTTCAAGCGATTGCCCTCCCTCAGCCTCCCAGGTAGCTTGGACTGCACCACACTGGGAC 129 Query 8462 AAAA------GCCACCACGCCAAGCTAATTTTT-GTATTTTTAGTAGAGAGAGGGTTTCA 8514 | | ||||| | ||| ||||||||||| | ||||||||||| || || |||||| Sbjct 130 TACACCAGCTGCCACAATGCCTAGCTAATTTTTTGGATTTTTAGTAGTGACAGCGTTTCA 189 Query 8515 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTC 8574 | | ||||||||| |||||| || ||| | |||| |||||||| | ||||| |||||| Sbjct 190 CTGTATTGGCCAGGATGGTCTTGATCTCTTCACCT--TGTGATCCCCTTGCCTTGGCCTC 247 Query 8575 CCAAAGTGCTGGGATTACAGGCATGAGCCA 8604 | || |||||||||||||||| ||||||| Sbjct 248 CAAATTTGCTGGGATTACAGGCCTGAGCCA 277 >seq15131 Length=152 Score = 143 bits (158), Expect = 3e-29 Identities = 127/156 (81%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 8359 CAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAG 8418 |||| || |||||||||| ||||| ||||||||||||||| | | | || ||||| Sbjct 1 CAGGGTGTAGTGCAGTGGTACAATCTCAGCTCACTGCAACCTCTGATTTTCTGGCTCAAG 60 Query 8419 CTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCAC---GC 8475 | |||||||||||||||||| || |||||||||||||||||| | ||||||| || Sbjct 61 CAGTTCTCCTGCCTCAGCCTCTAG-GTAGCTGGGATTACAGGC---ACCCACCACAGTGC 116 Query 8476 CAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTT 8511 | ||||||||||||| ||||||||||||| ||||| Sbjct 117 CCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTT 152 >seq6382 Length=234 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 16/181 (9%) Strand=Plus/Plus Query 8351 CTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCG 8410 ||||||| |||| || ||| || |||| |||| |||||||||||| || ||||| || Sbjct 54 CTGTTGCACAGGGTGAAGTACAATGGCGCCATCTTTGCTCACTGCAACATCTGCCTCACG 113 Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA-------GG--- 8460 ||||||||| || |||| ||||||||||| |||||||||| |||| || Sbjct 114 GGTTCAAGCGATCGTCCTCCCTCAGCCTCCCAGGTAGCTGGGACTACACCACACTGGGAC 173 Query 8461 -----CAAAAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCA 8514 || ||||||| ||| |||||| |||||| ||||||||||| || || |||||| Sbjct 174 TACACCAGCTGCCACCATGCCTAGCTAATTTTTTGGATTTTTAGTAGTGACAGCGTTTCA 233 Query 8515 C 8515 | Sbjct 234 C 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521333098508200