Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq63 125 1e-23 >seq63 Length=2199633 Score = 125 bits (138), Expect = 1e-23 Identities = 271/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534 || ||||| ||||| ||||| || ||||| ||| | |||||||| || || | Sbjct 1194282 GGTGATTTGGGACCAGTTTATGGCTTTCAGTGGCGTCATTTTGGTGCTGAATATGGCACA 1194223 Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTAT--AACGACGT 50592 ||| | | ||||| ||| |||| | || |||||| | || |||| ||||| | Sbjct 1194222 TGCAATGATGATTACACTGGTAAAGGAATCGACCAACTGAAGGAAGTTATCGAACGAATT 1194163 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 |||| ||| ||| || || || ||| | ||||| || |||||||||| | || Sbjct 1194162 --AAAAGAAATCCCACTGACCGTCGCATTATCATGACAGCTTGGAATCCAATTCAGATTC 1194105 Query 50653 ATCAAACCGTTTTACCTCCGTGTCAT-GTTTTATGTCAATTTTATGCCACAGACAATGTT 50711 | | | || || || |||||| | || || |||||||||| | | || || Sbjct 1194104 CCGACATGGCATTGCCACCTTGTCATTGCTTGGTG-CAATTTTATGTCGCTGATGGTGAG 1194046 Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 | ||||||| || ||| | |||||||| |||||| | || |||||||||||| | Sbjct 1194045 CTTAGTTGTCAATTGTACCAACGTTCAGCTGACATGGGTCTTGGTGTTCCTTTCAACATT 1193986 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 |||||||| |||||| | || || |||| ||||| | | || | ||| || || Sbjct 1193985 GCTTCTTATGCTTTACTCACTTACATGATTGCTCATGTCACGAATCTTAAAATTGGCGAT 1193926 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCA 50872 ||||||||||| | || || || ||| ||||| | |||| Sbjct 1193925 TTTATTCATACACTCGGCGATGCGCATGTTTACTTGAATCA 1193885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666877053650280